RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 GPR34Q9UPC5 381 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 HS3ST2Q9Y278 367 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 OR51B4Q9Y5P0 310 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 FADS3Q9Y5Q0 445 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 CLIC4Q9Y696 253 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 RNF215Q9Y6U7 377 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 ABCA2Q9BZC7 2435 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 RP1P56715 2156 aa4.67□□□□□ -1.66
SNHG1-214ENST00000540865 COL27A1Q8IZC6 1860 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CSMD2Q7Z408 3487 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MYH10P35580 1976 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PVALEFA0A1B0GWK0 134 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 WIPF3A6NGB9 483 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 IGLON5A6NGN9 336 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 EFCAB7A8K855 629 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 TMEM110-MUSTN1A8MSY1 372 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 F5H5T6 163 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MKRN2OSH3BPM6 223 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MAPK13O15264 365 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SPTLC2O15270 562 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 NKX2-8O15522 239 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 TSPAN6O43657 245 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 RAD1O60671 282 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FBXO21O94952 628 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CLDN1O95832 211 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 APOEP02649 317 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FYNP06241 537 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SRCP12931 536 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CCL4P13236 92 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 LCP1P13796 627 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 ADRB3P13945 408 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FUT4P22083 530 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 L1CAMP32004 1257 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 GTF2H1P32780 548 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 UGT1A3P35503 534 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 VAMP7P51809 220 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KRT83P78385 493 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MC1RQ01726 317 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CDC20Q12834 499 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 C16orf72Q14CZ0 275 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FXNQ16595 210 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CLPPQ16740 277 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 DEFB109BQ30KR1 87 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CERCAMQ5T4B2 595 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PHF19Q5T6S3 580 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 RAP1GAP2Q684P5 730 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 TCTN3Q6NUS6 607 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CRTC3Q6UUV7 619 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MACC1Q6ZN28 852 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 BEND5Q7L4P6 421 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SPRED1Q7Z699 444 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CHSY1Q86X52 802 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 GKN2Q86XP6 184 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FAM114A1Q8IWE2 563 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SLC34A3Q8N130 599 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PDILTQ8N807 584 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 ATP6V0D2Q8N8Y2 350 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 Q8N9G6 341 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 ATP11CQ8NB49 1132 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CHST14Q8NCH0 376 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CCDC112Q8NEF3 446 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 GPR156Q8NFN8 814 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PCDH19Q8TAB3 1148 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 UBA3Q8TBC4 463 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 DQX1Q8TE96 717 aaKnown RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SLC35F5Q8WV83 523 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 RAB7BQ96AH8 199 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KIAA1143Q96AT1 154 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CENPTQ96BT3 561 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 HSFY1Q96LI6 401 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PRMT1Q99873 361 aaKnown RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 DDA1Q9BW61 102 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 EDEM3Q9BZQ6 932 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KLHL25Q9H0H3 589 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 NOL6Q9H6R4 1146 aaKnown RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 MAGEF1Q9HAY2 307 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 DONSONQ9NYP3 566 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 DKK3Q9UBP4 350 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 APEX2Q9UBZ4 518 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 IL36AQ9UHA7 158 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SLC12A6Q9UHW9 1150 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 XPO7Q9UIA9 1087 aaKnown RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 VPS28Q9UK41 221 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KIAA1257Q9ULG3 409 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 PNMA8BQ9ULN7 279 aaPredicted RBP4.66□□□□□ -1.66
SNHG1-214ENST00000540865 TP53TG5Q9Y2B4 290 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 FRMD4BQ9Y2L6 1034 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KCTD3Q9Y597 815 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 CCDC168Q8NDH2 2452 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 KIF26BQ2KJY2 2108 aa4.66□□□□□ -1.66
SNHG1-214ENST00000540865 SPG11Q96JI7 2443 aa4.65□□□□□ -1.66
SNHG1-214ENST00000540865 PCNX1Q96RV3 2341 aa4.65□□□□□ -1.66
SNHG1-214ENST00000540865 KCNU1A8MYU2 1149 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 RNF103O00237 685 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 AGRPO00253 132 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 O00370 1275 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 PDXKO00764 312 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 NUDT21O43809 227 aaKnown RBP4.65□□□□□ -1.67
SNHG1-214ENST00000540865 DUX1O43812 170 aa4.65□□□□□ -1.67
SNHG1-214ENST00000540865 CLDN11O75508 207 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms