RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MYBPHLA2RUH7 354 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 H0Y858 1186 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 AXLP30530 894 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ADCYAP1R1P41586 468 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 RPS9P46781 194 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 POLD3Q15054 466 aaPredicted RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 HECTD2Q5U5R9 776 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ISCA2Q86U28 154 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ITIH5Q86UX2 942 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 PACRGLQ8N7B6 248 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 TRPV3Q8NET8 790 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 NUDT8Q8WV74 236 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 MRGPRX2Q96LB1 330 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 VAT1Q99536 393 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 MID1IP1Q9NPA3 183 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 TLR9Q9NR96 1032 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 GDAP2Q9NXN4 497 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 AAR2Q9Y312 384 aaKnown RBP13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 DGKBQ9Y6T7 804 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 ZSWIM8A7E2V4 1837 aa13.93□□□□□ -0.18
SCNN1A-215ENST00000540037 AQP12BA6NM10 295 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 AXIN1O15169 862 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 CDK14O94921 469 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 IMPDH1P20839 514 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SHMT2P34897 504 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 HALP42357 657 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ACADVLP49748 655 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 PHEXP78562 749 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 C1QTNF12Q5T7M4 302 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ARHGAP12Q8IWW6 846 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 AQP12AQ8IXF9 295 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ZNF420Q8TAQ5 688 aaPredicted RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SNX19Q92543 992 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC35B4Q969S0 331 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 FEM1CQ96JP0 617 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 UBXN10Q96LJ8 280 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC9A7Q96T83 725 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC30A3Q99726 388 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ACTR3BQ9P1U1 418 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 DERAQ9Y315 318 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 NDUFAF1Q9Y375 327 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 BAIAP3O94812 1187 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 RFC2P35250 354 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ADRA1AP35348 466 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 GSK3BP49841 420 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 KPNA1P52294 538 aaPredicted RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 BFSP2Q13515 415 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 LCN8Q6JVE9 175 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 PIWIL3Q7Z3Z3 882 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 TWIST2Q8WVJ9 160 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 TUBGCP3Q96CW5 907 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ZFP42Q96MM3 310 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 MAF1Q9H063 256 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 KCTD3Q9Y597 815 aa13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
SCNN1A-215ENST00000540037 ASPDHA6ND91 283 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 DYNC1LI2O43237 492 aaPredicted RBP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 CACNG3O60359 315 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PCNAP12004 261 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 HGFP14210 728 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 TCF3P15923 654 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 CCNA2P20248 432 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 HCAR3P49019 387 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 ARSDP51689 593 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 MAXP61244 160 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PTPRCAPQ14761 206 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 ARL13BQ3SXY8 428 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 TAC4Q86UU9 113 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 GLT1D1Q96MS3 346 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC39A8Q9C0K1 460 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 LHPPQ9H008 270 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 SLC27A5Q9Y2P5 690 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 TCRBV5S2A0A599 114 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 SYNCRIPO60506 623 aaKnown RBP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 MAFKO60675 156 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 SULT1C4O75897 302 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 HSD17B1P14061 328 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 MOGQ16653 247 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PFKFB4Q16877 469 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PDCD4Q53EL6 469 aaKnown RBP13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 TMTC4Q5T4D3 741 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PHYKPLQ8IUZ5 450 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 MIER2Q8N344 545 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 OR6P1Q8NGX9 317 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 PCED1BQ96HM7 432 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 FCRL5Q96RD9 977 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 ALG2Q9H553 416 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 NANOGQ9H9S0 305 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 ELP3Q9H9T3 547 aa13.91□□□□□ -0.18
SCNN1A-215ENST00000540037 POLR3BQ9NW08 1133 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms