RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 AGO1Q9UL18 857 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 FGF4P08620 206 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 PPP3CCP48454 512 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 ATP4BP51164 291 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 THOP1P52888 689 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 PDAP1Q13442 181 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 ARHGEF6Q15052 776 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 TPGS2Q68CL5 300 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 ZNF783Q6ZMS7 281 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 RPS27LQ71UM5 84 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 APLFQ8IW19 511 aaPredicted RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 CLYBLQ8N0X4 340 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 MDGA1Q8NFP4 955 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 LPGAT1Q92604 370 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 GATA6Q92908 595 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 RMDN1Q96DB5 314 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 MRPL1Q9BYD6 325 aaKnown RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 STOML2Q9UJZ1 356 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 MTF2Q9Y483 593 aaPredicted RBP17.9■□□□□ 0.46
GNE-204ENST00000539208 ANKRD36A6QL64 1941 aa17.9■□□□□ 0.46
GNE-204ENST00000539208 KIF3CO14782 793 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 PEX1O43933 1283 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 SGSHP51688 502 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 UGT3A2Q3SY77 523 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 LARP4Q71RC2 724 aaKnown RBP eCLIP17.89■□□□□ 0.45
GNE-204ENST00000539208 GLT6D1Q7Z4J2 308 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 RAB44Q7Z6P3 723 aaPredicted RBP17.89■□□□□ 0.45
GNE-204ENST00000539208 OR4K2Q8NGD2 314 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 SCLYQ96I15 445 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 ATOH8Q96SQ7 321 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 TAS2R13Q9NYV9 303 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 VPS9D1Q9Y2B5 631 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 FIS1Q9Y3D6 152 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 GPC4O75487 556 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 ENO3P13929 434 aaPredicted RBP17.89■□□□□ 0.45
GNE-204ENST00000539208 MTHFD2P13995 350 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 RAG1P15918 1043 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 ME2P23368 584 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 PSMD8P48556 350 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 CEACAM7Q14002 265 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 OR4D1Q15615 310 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 CXorf57Q6NSI4 855 aaKnown RBP17.89■□□□□ 0.45
GNE-204ENST00000539208 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 CYHR1Q6ZMK1 362 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 PDSS2Q86YH6 399 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 KIAA1191Q96A73 305 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 ADGRE3Q9BY15 652 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 KLHL4Q9C0H6 718 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 RNF38Q9H0F5 515 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 C6orf203Q9P0P8 240 aaPredicted RBP17.89■□□□□ 0.45
GNE-204ENST00000539208 PSMD13Q9UNM6 376 aa17.89■□□□□ 0.45
GNE-204ENST00000539208 LCHNA4D1U4 455 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 PSMD12O00232 456 aaPredicted RBP17.88■□□□□ 0.45
GNE-204ENST00000539208 CD9P21926 228 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 LPOP22079 712 aaPredicted RBP17.88■□□□□ 0.45
GNE-204ENST00000539208 ATP6V0D1P61421 351 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 ZFP1Q6P2D0 407 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 PLCD3Q8N3E9 789 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 PTGR2Q8N8N7 351 aaPredicted RBP17.88■□□□□ 0.45
GNE-204ENST00000539208 HIPK4Q8NE63 616 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 HMGCLL1Q8TB92 370 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 STAG3L4Q8TBR4 150 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 UCMAQ8WVF2 138 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 PPP2R3CQ969Q6 453 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 VCXQ9H320 206 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 SARDHQ9UL12 918 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 MED16Q9Y2X0 877 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 RAI2Q9Y5P3 530 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 TANC1Q9C0D5 1861 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 SCN5AQ14524 2016 aa17.88■□□□□ 0.45
GNE-204ENST00000539208 CCDC189A1A4V9 331 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 MAGEA13PA6NCF6 341 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 H3BMM5 538 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 CBX4O00257 560 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 KERAO60938 352 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 LATS1O95835 1130 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 DPP6P42658 865 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 ALDH1A3P47895 512 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 ACADVLP49748 655 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 FASTKQ14296 549 aaKnown RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 SETMARQ53H47 684 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 RNF219Q5W0B1 726 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 CAPRIN2Q6IMN6 1127 aaKnown RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 TMEM126BQ8IUX1 230 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 HERC6Q8IVU3 1022 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 MFN1Q8IWA4 741 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 NPAS2Q99743 824 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 MRPL40Q9NQ50 206 aaKnown RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 ANKRD66B4E2M5 251 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 CFLARO15519 480 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 PQBP1O60828 265 aaKnown RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 NDUFS3O75489 264 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 BCAS2O75934 225 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 XRCC1P18887 633 aaPredicted RBP17.87■□□□□ 0.45
GNE-204ENST00000539208 NAA20P61599 178 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 SH3BP2P78314 561 aa17.87■□□□□ 0.45
GNE-204ENST00000539208 FLOT2Q14254 428 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms