RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 DTNAQ9Y4J8 743 aa24.88■■□□□ 1.57
RAB40C-204ENST00000538492 E7ENX8 843 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 STX5Q13190 355 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 ANKS3Q6ZW76 656 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 ICA1LQ8NDH6 482 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 FBXO22Q8NEZ5 403 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 OR4K2Q8NGD2 314 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 C19orf60Q96EN9 201 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 PRICKLE1Q96MT3 831 aaPredicted RBP24.87■■□□□ 1.57
RAB40C-204ENST00000538492 KLHL32Q96NJ5 620 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 NSUN5Q96P11 429 aaKnown RBP24.87■■□□□ 1.57
RAB40C-204ENST00000538492 SLC24A3Q9HC58 644 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 H7C4K7 107 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 ARVCFO00192 962 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 FMO4P31512 558 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 OXCT1P55809 520 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 XIAPP98170 497 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 FBXO48Q5FWF7 155 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 PAOXQ6QHF9 649 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 LAYNQ6UX15 382 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 SPATA24Q86W54 205 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 LRGUKQ96M69 825 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 AARSD1Q9BTE6 412 aaKnown RBP24.87■■□□□ 1.57
RAB40C-204ENST00000538492 GKN1Q9NS71 199 aa24.87■■□□□ 1.57
RAB40C-204ENST00000538492 ACOT8O14734 319 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 BCAS2O75934 225 aaPredicted RBP24.86■■□□□ 1.57
RAB40C-204ENST00000538492 SLC11A2P49281 568 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 NFKB2Q00653 900 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 FOXB2Q5VYV0 432 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 ALG1LQ6GMV1 187 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 LARP4Q71RC2 724 aaKnown RBP eCLIP24.86■■□□□ 1.57
RAB40C-204ENST00000538492 GLT6D1Q7Z4J2 308 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 PSKH2Q96QS6 385 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 MID1IP1Q9NPA3 183 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 GIMAP2Q9UG22 337 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 FNDC3AQ9Y2H6 1198 aaKnown RBP24.86■■□□□ 1.57
RAB40C-204ENST00000538492 H3BNC9 293 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 MTHFD2P13995 350 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 LRP8Q14114 963 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 BTG3Q14201 252 aaPredicted RBP24.86■■□□□ 1.57
RAB40C-204ENST00000538492 UGT3A2Q3SY77 523 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 C5orf22Q49AR2 442 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 MDGA1Q8NFP4 955 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 ZBED2Q9BTP6 218 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 PCDHAC1Q9H158 963 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 COMMD8Q9NX08 183 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 UTP6Q9NYH9 597 aaKnown RBP24.86■■□□□ 1.57
RAB40C-204ENST00000538492 BCAP29Q9UHQ4 241 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 DNAJC15Q9Y5T4 150 aa24.86■■□□□ 1.57
RAB40C-204ENST00000538492 CBX4O00257 560 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 PEX1O43933 1283 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 CDK14O94921 469 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 CRTAMO95727 393 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 PENKP01210 267 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 GFAPP14136 432 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 OGNP20774 298 aaKnown RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 CDKN1CP49918 316 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 CDH4P55283 916 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 FOXA1P55317 472 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 RALGDSQ12967 914 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 MAPRE2Q15555 327 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 LILRA2Q8N149 483 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 DCUN1D1Q96GG9 259 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 TSEN34Q9BSV6 310 aaKnown RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 NLE1Q9NVX2 485 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 PDP2Q9P2J9 529 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 ASB3Q9Y575 518 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 TRIM38O00635 465 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 TSPAN3O60637 253 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 RHOBTB1O94844 696 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 KLKB1P03952 638 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 SNRPB2P08579 225 aaKnown RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 SUOXP51687 545 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 ZNF140P52738 457 aaPredicted RBP24.85■■□□□ 1.57
RAB40C-204ENST00000538492 NME5P56597 212 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 SMARCB1Q12824 385 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 ZFP1Q6P2D0 407 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 FBXL19Q6PCT2 694 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 PAQR3Q6TCH7 311 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 KCNA7Q96RP8 456 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 CYP2S1Q96SQ9 504 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 TTLL2Q9BWV7 592 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 PCDHGC4Q9Y5F7 938 aa24.85■■□□□ 1.57
RAB40C-204ENST00000538492 INSIG1O15503 277 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 COCHO43405 550 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 ALDOCP09972 364 aaKnown RBP24.84■■□□□ 1.57
RAB40C-204ENST00000538492 IRF1P10914 325 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 OR1D2P34982 312 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 CCNHP51946 323 aaPredicted RBP24.84■■□□□ 1.57
RAB40C-204ENST00000538492 FOLH1Q04609 750 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 ELAVL2Q12926 359 aaKnown RBP24.84■■□□□ 1.57
RAB40C-204ENST00000538492 TYSND1Q2T9J0 566 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 C16orf59Q7L2K0 433 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 CLYBLQ8N0X4 340 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 ATOH8Q96SQ7 321 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 AKTIPQ9H8T0 292 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 RIMS3Q9UJD0 308 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 ANKRD12Q6UB98 2062 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 ADGRE1Q14246 886 aa24.84■■□□□ 1.57
RAB40C-204ENST00000538492 PTPRRQ15256 657 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms