RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 ARL4CP56559 192 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 NAA20P61599 178 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CCZ1BP86790 482 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CCZ1P86791 482 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 GBE1Q04446 702 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MTAPQ13126 283 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CBLBQ13191 982 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PTK6Q13882 451 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PRKD1Q15139 912 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ELOCQ15369 112 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 GEN1Q17RS7 908 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 AASDHQ4L235 1098 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 BEND6Q5SZJ8 279 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ARMC4Q5T2S8 1044 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PMS2CLQ68D20 193 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MRNIPQ6NTE8 343 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ESRP1Q6NXG1 681 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 NCEH1Q6PIU2 408 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MFSD7Q6UXD7 560 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF683Q8IZ20 524 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CFAP52Q8N1V2 620 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RASGEF1CQ8N431 466 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CCDC33Q8N5R6 958 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 LRRC57Q8N9N7 239 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 DNAAF3Q8N9W5 541 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MAGEC3Q8TD91 643 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PANX3Q96QZ0 392 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RANBP9Q96S59 729 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 LYSMD1Q96S90 227 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SERINC2Q96SA4 455 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 OSBPL9Q96SU4 736 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SEMA3CQ99985 751 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 UQCC2Q9BRT2 126 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SLC13A1Q9BZW2 595 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 FOXQ1Q9C009 403 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 IL22Q9GZX6 179 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 GOLPH3Q9H4A6 298 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ACP6Q9NPH0 428 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PAPOLBQ9NRJ5 636 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MPP6Q9NZW5 540 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ASIC3Q9UHC3 531 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PPM1HQ9ULR3 514 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SHOC2Q9UQ13 582 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PPIL1Q9Y3C6 166 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 OR51B4Q9Y5P0 310 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RAI2Q9Y5P3 530 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 VWA8A3KMH1 1905 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 DENND4AQ7Z401 1863 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 GOLGA6L7A0A1B0GV03 622 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 C16orf96A6NNT2 1141 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 K7EQS6 105 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RNF103O00237 685 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ATMINO43313 823 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PLRG1O43660 514 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SNX2O60749 519 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ZMPSTE24O75844 475 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PGLSO95336 258 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ANXA6P08133 673 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ADRB3P13945 408 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CTSEP14091 401 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ITIH2P19823 946 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 LPOP22079 712 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PTPN3P26045 913 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SLC6A11P48066 632 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ARSEP51690 589 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 OTUD4Q01804 1114 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ILF3Q12906 894 aaKnown RBP eCLIP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CUL3Q13618 768 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 THOC5Q13769 683 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 LRRC14Q15048 493 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CCDC142Q17RM4 750 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PAPD7Q5XG87 772 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 NCBP2-AS2Q69YL0 99 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CAPN12Q6ZSI9 719 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PHYKPLQ8IUZ5 450 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 TBC1D19Q8N5T2 526 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PCDH19Q8TAB3 1148 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ACTL9Q8TC94 416 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 EPS8L3Q8TE67 593 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 STYXQ8WUJ0 223 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 DNASE2BQ8WZ79 361 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 NDRG1Q92597 394 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RTP4Q96DX8 246 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 TSPAN17Q96FV3 270 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF419Q96HQ0 510 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CABS1Q96KC9 395 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 RBM14Q96PK6 669 aaKnown RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 NR1H4Q96RI1 486 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CCM2Q9BSQ5 444 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 STMN4Q9H169 189 aaPredicted RBP3.58□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM9BQ9NQ34 198 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 KLHL11Q9NVR0 708 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PLK2Q9NYY3 685 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 VPS18Q9P253 973 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 CDC23Q9UJX2 597 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 PCDHGB3Q9Y5G1 929 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 TTC34A8MYJ7 566 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 MATN2O00339 956 aa3.58□□□□□ -1.84
PTPN22-211ENST00000538253 TPP1O14773 563 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms