RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MFSD2AQ8NA29 543 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 OR52K1Q8NGK4 314 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 NUS1Q96E22 293 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 TRIM51Q9BSJ1 452 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 RAB6BQ9NRW1 208 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 ARL5AQ9Y689 179 aa13.07□□□□□ -0.32
CHFR-216ENST00000538235 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 PSMD11O00231 422 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 KHNYNO15037 678 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 SCAMP1O15126 338 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 LZTS3O60299 673 aaPredicted RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 ANXA9O76027 345 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 STK10O94804 968 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 SUN1O94901 812 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 EPOP01588 193 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 KRT14P02533 472 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 FGF1P05230 155 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 BPIP17213 487 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 HLA-DPA1P20036 260 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 IVDP26440 423 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 CASQ1P31415 396 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 AKT2P31751 481 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 STIP1P31948 543 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 SPINT3P49223 89 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 INPP5AQ14642 412 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 LRRC14Q15048 493 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 ZNF423Q2M1K9 1284 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 KHDC1Q4VXA5 237 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 HENMT1Q5T8I9 393 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 Q6ZSR6 202 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 KLHL7Q8IXQ5 586 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 RBFAQ8N0V3 343 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 MINDY1Q8N5J2 469 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 OR13C4Q8NGS5 318 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 BLOC1S5Q8TDH9 187 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 MAIP1Q8WWC4 291 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 CPT1BQ92523 772 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 TRIM56Q9BRZ2 755 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 RIOK2Q9BVS4 552 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 FSD1LQ9BXM9 530 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 ARNT2Q9HBZ2 717 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 MAGEE1Q9HCI5 957 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 BPIFA1Q9NP55 256 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
CHFR-216ENST00000538235 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 OAS3Q9Y6K5 1087 aaKnown RBP13.06□□□□□ -0.32
CHFR-216ENST00000538235 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.05□□□□□ -0.32
CHFR-216ENST00000538235 CCDC78A2IDD5 438 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 TMEM202A6NGA9 273 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 A6NNZ2 444 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 TLR4O00206 839 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 LDB2O43679 373 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 PRSS56P0CW18 603 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 GIMD1P0DJR0 217 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ZNF30P17039 623 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 CA4P22748 312 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 FNTAP49354 379 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ZNF140P52738 457 aaPredicted RBP13.05□□□□□ -0.32
CHFR-216ENST00000538235 SGCGQ13326 291 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ARHGEF7Q14155 803 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 HLA-BQ31612 363 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 CERCAMQ5T4B2 595 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ZNF648Q5T619 568 aaPredicted RBP13.05□□□□□ -0.32
CHFR-216ENST00000538235 CCDC89Q8N998 374 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 NAT14Q8WUY8 206 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 SLCO2A1Q92959 643 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 PDXPQ96GD0 296 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ZNF778Q96MU6 729 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ADGRE3Q9BY15 652 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 FGF22Q9HCT0 170 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 MRPL40Q9NQ50 206 aaKnown RBP13.05□□□□□ -0.32
CHFR-216ENST00000538235 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 IL17CQ9P0M4 197 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 PAK5Q9P286 719 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 BTBD3Q9Y2F9 522 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 HS3ST3A1Q9Y663 406 aa13.05□□□□□ -0.32
CHFR-216ENST00000538235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 TTI1O43156 1089 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 SDC3O75056 442 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 CD59P13987 128 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 GNSP15586 552 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 TRIM23P36406 574 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 NUDT1P36639 197 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 FDFT1P37268 417 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 MAGEA6P43360 314 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 ARSDP51689 593 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 CRADDP78560 199 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 BNIP3Q12983 259 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 GPS1Q13098 491 aa13.04□□□□□ -0.32
CHFR-216ENST00000538235 PDE1CQ14123 709 aaPredicted RBP13.04□□□□□ -0.32
CHFR-216ENST00000538235 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms