RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 RIPK3Q9Y572 518 aa10.7□□□□□ -0.7
RTN3-208ENST00000537981 SNX2O60749 519 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 TP53P04637 393 aaPredicted RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 SBK3P0C264 359 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PCMT1P22061 227 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 S100A5P33763 92 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PIGAP37287 484 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 NOVP48745 357 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 MLLT6P55198 1093 aaPredicted RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 GCNT1Q02742 428 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 DSC3Q14574 896 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 KCTD20Q7Z5Y7 419 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 RBM23Q86U06 439 aaKnown RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 WDTC1Q8N5D0 677 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 CNTD1Q8N815 330 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 DNERQ8NFT8 737 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 ACCSQ96QU6 501 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 GAD1Q99259 594 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 C1QTNF7Q9BXJ2 289 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 SYTL2Q9HCH5 934 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 TIGARQ9NQ88 270 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 C14orf119Q9NWQ9 140 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 TMEM181Q9P2C4 612 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 DCDC2Q9UHG0 476 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 CDYLQ9Y232 598 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PCDHA11Q9Y5I1 949 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 LRRIQ4A6NIV6 560 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PDZK1P1A8MUH7 402 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 LINC01387J3KSC0 135 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 RNF103O00237 685 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 XPNPEP2O43895 674 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 LRPAP1P30533 357 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 GGT5P36269 586 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 GJA9P57773 515 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 SNRPD2P62316 118 aaKnown RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 GBE1Q04446 702 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PPP1R8Q12972 351 aaKnown RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 TUBA3CQ13748 450 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 SELPLGQ14242 412 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PRPSAP1Q14558 356 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 YIF1BQ5BJH7 314 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 TOR2AQ5JU69 321 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 C6orf132Q5T0Z8 1188 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 LRRC38Q5VT99 294 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 KIAA0907Q7Z7F0 614 aaPredicted RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 C12orf56Q8IXR9 622 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 COLGALT2Q8IYK4 626 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 HS3ST5Q8IZT8 346 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 ZNF606Q8WXB4 792 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 TBCBQ99426 244 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 PDZD7Q9H5P4 517 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 RANGRFQ9HD47 186 aaPredicted RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 GPATCH2LQ9NWQ4 482 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 DCAF16Q9NXF7 216 aa10.69□□□□□ -0.7
RTN3-208ENST00000537981 MAGED2Q9UNF1 606 aaPredicted RBP10.69□□□□□ -0.7
RTN3-208ENST00000537981 CENPXA8MT69 81 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PSMD10O75832 226 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 FASP25445 335 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PKLRP30613 574 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 MAGEA3P43357 314 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PSMD8P48556 350 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SLC9A3P48764 834 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SESN2P58004 480 aaPredicted RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 OR2B6P58173 313 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 ACTR2P61160 394 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 MPP1Q00013 466 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 ALDH6A1Q02252 535 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 SLAMF1Q13291 335 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 BAATQ14032 418 aaPredicted RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 TDRD10Q5VZ19 366 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 IFNEQ86WN2 208 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 CHAC2Q8WUX2 184 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 NXNL1Q96CM4 212 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 CENPNQ96H22 339 aaPredicted RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 SEPHS2Q99611 448 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 C9orf16Q9BUW7 83 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 MAGEB5Q9BZ81 275 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 REXO4Q9GZR2 422 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 SDCBP2Q9H190 292 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 CD320Q9NPF0 282 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 TBC1D13Q9NVG8 400 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SCAF8Q9UPN6 1271 aaKnown RBP10.68□□□□□ -0.7
RTN3-208ENST00000537981 INVSQ9Y283 1065 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 HCN4Q9Y3Q4 1203 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PCDHGA10Q9Y5H3 936 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 LINC00854A0A1B0GVQ3 168 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SLC12A8A0AV02 714 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 PRRT4C9JH25 899 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 SDHDO14521 159 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 AKR7A2O43488 359 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 TRIM13O60858 407 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 VNN1O95497 513 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 HLA-DRAP01903 254 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 KRT6AP02538 564 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 KRT6BP04259 564 aa10.68□□□□□ -0.7
RTN3-208ENST00000537981 ARP10275 920 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms