RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 COG5Q9UP83 839 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 DERAQ9Y315 318 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 REXO2Q9Y3B8 237 aaKnown RBP2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 ATP6V1DQ9Y5K8 247 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 SNX9Q9Y5X1 595 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 ANK1P16157 1881 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 NLRC5Q86WI3 1866 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 CITO14578 2027 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 COL4A3Q01955 1670 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 MYH15Q9Y2K3 1946 aa2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 SF3B1O75533 1304 aaKnown RBP eCLIP2.66□□□□□ -1.98
TNFRSF1A-210ENST00000537842 NBEAQ8NFP9 2946 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 A0A1W2PPH5 198 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 MTMR11A4FU01 709 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PGPEP1LA6NFU8 196 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 LGALS16A8MUM7 142 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 EFCAB8A8MWE9 144 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PRR5-ARHGAP8B1AHC4 643 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PATE3B3GLJ2 98 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 HHLA1C9JL84 531 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ANHXE9PGG2 379 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PI4K2BG5E9Z4 385 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 H7C0S8 307 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PRRG2O14669 202 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 IKBKBO14920 756 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 KIAA0391O15091 583 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 EPHB6O15197 1021 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 P4HA2O15460 535 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PI15O43692 258 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 EXOC3O60645 756 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 NOL4O94818 638 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 SCGB1D1O95968 90 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GLUD1P00367 558 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ASS1P00966 412 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 URODP06132 367 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 RHOP08100 348 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 KRT19P08727 400 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ACADMP11310 421 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GLULP15104 373 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ZNF20P17024 532 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 HOXB8P17481 243 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 DESP17661 470 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CEBPBP17676 345 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 TNNI1P19237 187 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 TYMPP19971 482 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 FPR1P21462 350 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 WARSP23381 471 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 NR2F2P24468 414 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CCNE1P24864 410 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GALNSP34059 522 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CA8P35219 290 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GNL1P36915 607 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ANP32AP39687 249 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ARL1P40616 181 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 VIPR2P41587 438 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ALDH1A3P47895 512 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 POLD2P49005 469 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 KLK7P49862 253 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GZMKP49863 264 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 VAMP7P51809 220 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 HK3P52790 923 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 RAD23BP54727 409 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 DCAF7P61962 342 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PSMC1P62191 440 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 SNRPFP62306 86 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ADAM8P78325 824 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 RBP5P82980 135 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 YWHAHQ04917 246 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 TWF1Q12792 350 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 DUSP8Q13202 625 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PMS2P11Q13670 270 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ALCAMQ13740 583 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 HABP2Q14520 560 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PUM1Q14671 1186 aaKnown RBP eCLIP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PRKD1Q15139 912 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 MEA1Q16626 185 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 KYAT1Q16773 422 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CTXN3Q4LDR2 81 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GAGE13Q4V321 117 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 SLC39A12Q504Y0 691 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 USP39Q53GS9 565 aaKnown RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 HSP90AA4PQ58FG1 418 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 MIIPQ5JXC2 388 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 NAIF1Q69YI7 327 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 TANGO2Q6ICL3 276 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 KLHL10Q6JEL2 608 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 PARM1Q6UWI2 310 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 SCARA5Q6ZMJ2 495 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 C11orf57Q6ZUT1 292 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 BTN2A1Q7KYR7 527 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ENOSF1Q7L5Y1 443 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 BHLHA9Q7RTU4 235 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 GPRIN1Q7Z2K8 1008 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 SPRED1Q7Z699 444 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 DNAJB7Q7Z6W7 309 aaPredicted RBP2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CPLX4Q7Z7G2 160 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ARMC8Q8IUR7 673 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 WDR49Q8IV35 697 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 ARHGEF19Q8IW93 802 aa2.65□□□□□ -1.99
TNFRSF1A-210ENST00000537842 CD302Q8IX05 232 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms