RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 VIPR1P32241 457 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ETV5P41161 510 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CDK3Q00526 305 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 SLC10A7Q0GE19 358 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 LBRQ14739 615 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 TBR1Q16650 682 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CLEC18BQ6UXF7 455 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ATG14Q6ZNE5 492 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 RD3Q7Z3Z2 195 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 POLNQ7Z5Q5 900 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ZNF354CQ86Y25 554 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 NAGSQ8N159 534 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 NIPA2Q8N8Q9 360 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 BMPERQ8N8U9 685 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CLEC18CQ8NCF0 446 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CCL4L1Q8NHW4 92 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 TEKT4Q8WW24 435 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 USP7Q93009 1102 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 NKD1Q969G9 470 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 COX14Q96I36 57 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 TEFMQ96QE5 360 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 KCTD15Q96SI1 283 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ISCUQ9H1K1 167 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 SEMA6CQ9H3T2 930 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 DPEP2Q9H4A9 486 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 CYP4F12Q9HCS2 524 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 MRPL40Q9NQ50 206 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 AKAP7Q9P0M2 348 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 TAAR2Q9P1P5 351 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 RCOR3Q9P2K3 495 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
CLSTN3-206ENST00000535668 IGHV1OR21-1A0A087WYE8 117 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 PGLSO95336 258 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 FGF3P11487 239 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 CYP2A6P11509 494 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ZNF30P17039 623 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 WT1P19544 449 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ITIH1P19827 911 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 LHCGRP22888 699 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 PSMA2P25787 234 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SCNN1BP51168 640 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 CDH6P55285 790 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 RAB15P59190 212 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 RPL26P61254 145 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 UBXN1Q04323 297 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 FIGNQ5HY92 759 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 MANEAQ5SRI9 462 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 TMEM71Q6P5X7 295 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 FOXR1Q6PIV2 292 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 WDR74Q6RFH5 385 aaPredicted RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ARHGAP22Q7Z5H3 698 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 HEATR4Q86WZ0 1026 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SFTPA2Q8IWL1 248 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 NRSN1Q8IZ57 195 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SFRP1Q8N474 314 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 AGBL5Q8NDL9 886 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 PIH1D2Q8WWB5 315 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 HTR3CQ8WXA8 447 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 NUS1Q96E22 293 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 CELF6Q96J87 481 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 CATSPER2Q96P56 530 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ZPBPQ9BS86 351 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SLC25A18Q9H1K4 315 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 DHX35Q9H5Z1 703 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SP110Q9HB58 689 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 ANO10Q9NW15 660 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 TAS2R14Q9NYV8 317 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 VPS18Q9P253 973 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 DNPEPQ9ULA0 475 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 RPL26L1Q9UNX3 145 aaKnown RBP11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 SCINQ9Y6U3 715 aa11.19□□□□□ -0.62
CLSTN3-206ENST00000535668 RGSL1A5PLK6 1076 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 PPM1DO15297 605 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 PPFIA2O75334 1257 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 ADCY8P40145 1251 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 CLCNKAP51800 687 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 CTBSQ01459 385 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 ACOX1Q15067 660 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 PYCR3Q53H96 274 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 ARHGAP36Q6ZRI8 547 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 ZFAND4Q86XD8 727 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 JAMLQ86YT9 394 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 PGBD5Q8N414 524 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 CCDC112Q8NEF3 446 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 MAML1Q92585 1016 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 EXTL1Q92935 676 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 SLC45A3Q96JT2 553 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 TSGA13Q96PP4 275 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 BPIFA3Q9BQP9 254 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 EPB41L1Q9H4G0 881 aa11.18□□□□□ -0.62
CLSTN3-206ENST00000535668 CARS2Q9HA77 564 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms