RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 PRLP01236 227 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 JCHAINP01591 159 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 HLA-DQB2P05538 268 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 CEACAM5P06731 702 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 CDK3Q00526 305 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 NIPAL4Q0D2K0 466 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 PTPRRQ15256 657 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 LRRC69Q6ZNQ3 347 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 HEATR4Q86WZ0 1026 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 FAM46DQ8NEK8 389 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.25■■□□□ 1.31
YIF1A-213ENST00000534374 LYSMD1Q96S90 227 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 TRIM5Q9C035 493 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 DDX56Q9NY93 547 aaKnown RBP23.25■■□□□ 1.31
YIF1A-213ENST00000534374 SIRPGQ9P1W8 387 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 CHKBQ9Y259 395 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 NBEAQ8NFP9 2946 aa23.25■■□□□ 1.31
YIF1A-213ENST00000534374 PTPRQQ9UMZ3 2332 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 NTN3O00634 580 aaPredicted RBP23.24■■□□□ 1.31
YIF1A-213ENST00000534374 IFI35P80217 286 aaPredicted RBP23.24■■□□□ 1.31
YIF1A-213ENST00000534374 COL9A2Q14055 689 aaPredicted RBP23.24■■□□□ 1.31
YIF1A-213ENST00000534374 PDK1Q15118 436 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 LRRC66Q68CR7 880 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 IGF2-ASQ6U949 168 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 ZNF765Q7L2R6 523 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 PDZD3Q86UT5 571 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 RHOT1Q8IXI2 618 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 NRSN1Q8IZ57 195 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 KYQ8NBH2 561 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 GPBAR1Q8TDU6 330 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 DCBLD2Q96PD2 775 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 LGMNQ99538 433 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 FRMD8Q9BZ67 464 aaPredicted RBP23.24■■□□□ 1.31
YIF1A-213ENST00000534374 BRD8Q9H0E9 1235 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 PCDH9Q9HC56 1237 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 TRNAU1APQ9NX07 287 aaKnown RBP23.24■■□□□ 1.31
YIF1A-213ENST00000534374 MOSPD1Q9UJG1 213 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 TTLL3Q9Y4R7 772 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 HEY1Q9Y5J3 304 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 ENTPD2Q9Y5L3 495 aa23.24■■□□□ 1.31
YIF1A-213ENST00000534374 APOL1O14791 398 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 MPOP05164 745 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 PYGLP06737 847 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 HOXB3P14651 431 aaPredicted RBP23.23■■□□□ 1.31
YIF1A-213ENST00000534374 PNLIPP16233 465 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 HADHBP55084 474 aaKnown RBP23.23■■□□□ 1.31
YIF1A-213ENST00000534374 ERVPABLB-1P60509 514 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 GABREP78334 506 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 SPIDRQ14159 915 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 TCEA2Q15560 299 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 RAET1GQ6H3X3 334 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.23■■□□□ 1.31
YIF1A-213ENST00000534374 TC2NQ8N9U0 490 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 LRRN4Q8WUT4 740 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 AP2M1Q96CW1 435 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 ABCG8Q9H221 673 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 APPL1Q9UKG1 709 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 SLC17A4Q9Y2C5 497 aa23.23■■□□□ 1.31
YIF1A-213ENST00000534374 CAPN8A6NHC0 703 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 KCNK1O00180 336 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 FUCA1P04066 466 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 GLB1P16278 677 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 MAGEA1P43355 309 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 ABCG1P45844 678 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 GPR1P46091 355 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 STC1P52823 247 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 KIF26BQ2KJY2 2108 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 ODF2Q5BJF6 829 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 ADAMTSL4Q6UY14 1074 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 CNTD1Q8N815 330 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 CCDC74AQ96AQ1 378 aa23.22■■□□□ 1.31
YIF1A-213ENST00000534374 SCARF2Q96GP6 870 aaPredicted RBP23.22■■□□□ 1.31
YIF1A-213ENST00000534374 CARS2Q9HA77 564 aaKnown RBP23.22■■□□□ 1.31
YIF1A-213ENST00000534374 ANKRD66B4E2M5 251 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 TMX2-CTNND1H3BSU7 103 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 NOBOXO60393 691 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 LCA5LO95447 670 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 IVLP07476 585 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 MMP2P08253 660 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 COMTP21964 271 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 BZW1Q7L1Q6 419 aaKnown RBP23.21■■□□□ 1.31
YIF1A-213ENST00000534374 CCDC170Q8IYT3 715 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 CCL4L1Q8NHW4 92 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 RNF25Q96BH1 459 aaPredicted RBP23.21■■□□□ 1.31
YIF1A-213ENST00000534374 ATXN7L3BQ96GX2 97 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 OLFM3Q96PB7 478 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 SMIM14Q96QK8 99 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 GSDMCQ9BYG8 508 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 DPEP2Q9H4A9 486 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 RABGEF1Q9UJ41 708 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 PCDHGA8Q9Y5G5 932 aa23.21■■□□□ 1.31
YIF1A-213ENST00000534374 COL27A1Q8IZC6 1860 aaPredicted RBP23.21■■□□□ 1.31
YIF1A-213ENST00000534374 A0A0U1RQS6 177 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 GOLGA6CA6NDK9 693 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 GOLGA6BA6NDN3 693 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 PPP1R12AO14974 1030 aaPredicted RBP23.2■■□□□ 1.3
YIF1A-213ENST00000534374 SOD1P00441 154 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 KRT1P04264 644 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 GOLGA6DP0CG33 693 aa23.2■■□□□ 1.3
YIF1A-213ENST00000534374 NR2C2P49116 596 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms