RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 DDI1Q8WTU0 396 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PDCD6IPQ8WUM4 868 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 UCMAQ8WVF2 138 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 POMGNT1Q8WZA1 660 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ERCC4Q92889 916 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PTPRN2Q92932 1015 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 GCDHQ92947 438 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SKA1Q96BD8 255 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 RNF31Q96EP0 1072 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MYEOVQ96EZ4 313 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 RPL10LQ96L21 214 aaKnown RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF560Q96MR9 790 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 GBP4Q96PP9 640 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 TSPAN18Q96SJ8 248 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 OMDQ99983 421 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 REEP2Q9BRK0 252 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MED10Q9BTT4 135 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SPATA9Q9BWV2 254 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FGFBP2Q9BYJ0 223 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 MTMR12Q9C0I1 747 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 RSPH9Q9H1X1 276 aaPredicted RBP3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SNX25Q9H3E2 840 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SYNDIG1Q9H7V2 258 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ERVMER34-1Q9H9K5 563 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 C17orf75Q9HAS0 396 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 EPB41L5Q9HCM4 733 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PREBQ9HCU5 417 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FZD3Q9NPG1 666 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ABCB8Q9NUT2 735 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 FOXJ2Q9P0K8 574 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNHIT2Q9UHR6 403 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SLCO3A1Q9UIG8 710 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 KCND3Q9UK17 655 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 ITGB1BP2Q9UKP3 347 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 CBLCQ9ULV8 474 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 NCKAP1Q9Y2A7 1128 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PRKAB1Q9Y478 270 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 PCDHGA8Q9Y5G5 932 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 NBEAL1Q6ZS30 2694 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 SCN1AP35498 2009 aa3.07□□□□□ -1.92
CHMP4A-208ENST00000534106 DCHS2Q6V1P9 2916 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 SLC12A8A0AV02 714 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 FAM92AA1XBS5 289 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CCDC66A2RUB6 948 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 LRRC72A6NJI9 287 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 A8MXQ7 604 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 HHLA1C9JL84 531 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 TIMM44O43615 452 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 DUX1O43812 170 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ZFC3H1O60293 1989 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 GCATO75600 419 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 PIAS2O75928 621 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 RHOBTB3O94955 611 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 RTN3O95197 1032 aaPredicted RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 SFTPCP11686 197 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CCL4P13236 92 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CCDC130P13994 396 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 XBP1P17861 261 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 MUTP22033 750 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 PSMA5P28066 241 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ADORA2BP29275 332 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CORO1AP31146 461 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 PNPLA4P41247 253 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 PSMD8P48556 350 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CCR5P51681 352 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF132P52740 706 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ADPRHP54922 357 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 MYL6P60660 151 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CCL7P80098 99 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 GTF2BQ00403 316 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 HGFACQ04756 655 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 MRPL49Q13405 166 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 MORC3Q14149 939 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 STAT4Q14765 748 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ELAVL1Q15717 326 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CST6Q15828 149 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ME3Q16798 604 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 DEFB133Q30KQ1 61 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 TTC38Q5R3I4 469 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 MANEAQ5SRI9 462 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ATP1A1-AS1Q5TC04 95 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 KRT79Q5XKE5 535 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ARID2Q68CP9 1835 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 HAUS3Q68CZ6 603 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 OR6B2Q6IFH4 312 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CAPRIN2Q6IMN6 1127 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 NAPEPLDQ6IQ20 393 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 RFWD3Q6PCD5 774 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 KLHDC10Q6PID8 442 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 RBM44Q6ZP01 1051 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 Q6ZRM9 215 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 KIAA1549LQ6ZVL6 1849 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF720Q7Z2F6 126 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 TMPRSS9Q7Z410 1059 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ACOT1Q86TX2 421 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 SCUBE1Q8IWY4 988 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 ZNF276Q8N554 614 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 CISD2Q8N5K1 135 aaKnown RBP3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 LRRC52Q8N7C0 313 aa3.06□□□□□ -1.92
CHMP4A-208ENST00000534106 C12orf29Q8N999 325 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms