RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 DSN1Q9H410 356 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 IL37Q9NZH6 218 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
TSKU-203ENST00000527881 SARDHQ9UL12 918 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 STYXL1Q9Y6J8 313 aa12.5□□□□□ -0.41
TSKU-203ENST00000527881 LINC00854A0A1B0GVQ3 168 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 SOAT2O75908 522 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 LRIG2O94898 1065 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 NMBRP28336 390 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 DAG1Q14118 895 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CTF1Q16619 201 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 STYK1Q6J9G0 422 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 LCN8Q6JVE9 175 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CCBE1Q6UXH8 406 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 GALNT12Q8IXK2 581 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 LEMD2Q8NC56 503 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 TMBIM1Q969X1 311 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 TUBGCP3Q96CW5 907 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 SLC30A3Q99726 388 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 PDCD2LQ9BRP1 358 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 SPEF1Q9Y4P9 236 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 FAM95CA0A1B0GW59 222 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CLRN2A0PK11 232 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 NPHS1O60500 1241 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 SPNP16150 400 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 KPNA2P52292 529 aaKnown RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 PLIN5Q00G26 463 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 XKR3Q5GH77 459 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 NCBP2-AS2Q69YL0 99 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 RYBPQ8N488 228 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 FKBP10Q96AY3 582 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 TMEM74Q96NL1 305 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 KCTD15Q96SI1 283 aaPredicted RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 GAD1Q99259 594 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 RHOJQ9H4E5 214 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 N6AMT1Q9Y5N5 214 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 H3BMM5 538 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 RGS13O14921 159 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 OGTO15294 1046 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 UPK1BO75841 260 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 KCNK2O95069 426 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 MAP2K4P45985 399 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CDH13P55290 713 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 RAB10P61026 200 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 STEAP3Q658P3 488 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 ZC3HC1Q86WB0 502 aaKnown RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 MIER2Q8N344 545 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 GOLM1Q8NBJ4 401 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 HEXDCQ8WVB3 486 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 LRRC58Q96CX6 371 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 VMP1Q96GC9 406 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 MRPL4Q9BYD3 311 aaKnown RBP12.49□□□□□ -0.41
TSKU-203ENST00000527881 XYLT2Q9H1B5 865 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 OSBPL2Q9H1P3 480 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 SP140LQ9H930 580 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 LRRC4Q9HBW1 653 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 CNTNAP4Q9C0A0 1308 aa12.49□□□□□ -0.41
TSKU-203ENST00000527881 HS6ST1O60243 411 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 CRCPO75575 148 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 DBTP11182 482 aaKnown RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 GP2P55259 537 aaKnown RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 TRAF3Q13114 568 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 USP51Q70EK9 711 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 BNIPLQ7Z465 357 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 BPHLQ86WA6 291 aaPredicted RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 LYSMD2Q8IV50 215 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 TRIB2Q92519 343 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 HDAC2Q92769 488 aaKnown RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.48□□□□□ -0.41
TSKU-203ENST00000527881 OMA1Q96E52 524 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 MED30Q96HR3 178 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 GPR22Q99680 433 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 RPAP3Q9H6T3 665 aaPredicted RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 RPRD1BQ9NQG5 326 aaKnown RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
TSKU-203ENST00000527881 PTGDR2Q9Y5Y4 395 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 ZCWPW2A0A1B0GU75 182 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 MDM4O15151 490 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 CHRNA1P02708 482 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 VDRP11473 427 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 CAPN3P20807 821 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 S100A5P33763 92 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 ALDH3A2P51648 485 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 ARPP19P56211 112 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 DEFA1P59665 94 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 DEFA3P59666 94 aa12.48□□□□□ -0.41
TSKU-203ENST00000527881 SPESP1Q6UW49 350 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms