RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC44A4Q53GD3 710 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 NOMO2Q5JPE7 1267 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 DDIASQ8IXT1 998 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 OFCC1Q8IZS5 231 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 OR6P1Q8NGX9 317 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 PPP1R14BQ96C90 147 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 POLR1BQ9H9Y6 1135 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 CCM2LQ9NUG4 571 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 ARMC1Q9NVT9 282 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 KIAA1522Q9P206 1035 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 DSEQ9UL01 958 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 COL1A2P08123 1366 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 IGHA2P01877 340 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 SLC4A1P02730 911 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 WARSP23381 471 aaKnown RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 HMOX2P30519 316 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 LDB1Q86U70 411 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 RETREG3Q86VR2 466 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 SLC22A9Q8IVM8 553 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 CPNE9Q8IYJ1 553 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 C19orf60Q96EN9 201 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 DUS3LQ96G46 650 aaKnown RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 B3GALT6Q96L58 329 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 C3orf30Q96M34 536 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 C9orf16Q9BUW7 83 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 TRIM8Q9BZR9 551 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 HIPK3Q9H422 1215 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 FAIMQ9NVQ4 179 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 OAZ3Q9UMX2 235 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 TMX2-CTNND1H3BSU7 103 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 NME4O00746 187 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 INPP4BO15327 924 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 MAPK10P53779 464 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 ITKQ08881 620 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 NEDD8Q15843 81 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 UBXN11Q5T124 520 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 DENND5AQ6IQ26 1287 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 FUNDC1Q8IVP5 155 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 TOP6BLQ8N6T0 577 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 FBXL20Q96IG2 436 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 FCRL5Q96RD9 977 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 SMOQ99835 787 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 KATNAL1Q9BW62 490 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 AKTIPQ9H8T0 292 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 TUBA8Q9NY65 449 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-208ENST00000527323 HACD3Q9P035 362 aa12.51□□□□□ -0.41
CAPN1-208ENST00000527323 MYBPHLA2RUH7 354 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 UBFD1O14562 309 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 NOL3O60936 208 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 ATE1O95260 518 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 CYP51A1Q16850 503 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 KIAA0319Q5VV43 1072 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 DCLRE1AQ6PJP8 1040 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 XKR5Q6UX68 686 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 ROPN1LQ96C74 230 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 TSPAN17Q96FV3 270 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 SH3GLB1Q9Y371 365 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 FADS3Q9Y5Q0 445 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 PTGDR2Q9Y5Y4 395 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 SPTBN5Q9NRC6 3674 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 SHROOM3Q8TF72 1996 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 A0A1W2PPW3 197 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 NT5C1B-RDH14C9J2C7 533 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 BOLA2-SMG1P6H3BVE0 249 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 MYF6P23409 242 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 EEF1B2P24534 225 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 CCNCP24863 283 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 LBX1P52954 281 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 GPR158Q5T848 1215 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 HECTD2Q5U5R9 776 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 C16orf87Q6PH81 154 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 LARP4Q71RC2 724 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■□□□□ 10.9
CAPN1-208ENST00000527323 DHRSXQ8N5I4 330 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 PTBP2Q9UKA9 531 aaKnown RBP12.5□□□□□ -0.41
CAPN1-208ENST00000527323 VWA7Q9Y334 891 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 V9GYQ6 96 aa12.5□□□□□ -0.41
CAPN1-208ENST00000527323 CHD9Q3L8U1 2897 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CCL22O00626 93 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 ALDOCP09972 364 aaKnown RBP12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CHRM3P20309 590 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 IMPDH1P20839 514 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CASP2P42575 452 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 CXCR3P49682 368 aa12.49□□□□□ -0.41
CAPN1-208ENST00000527323 ACADVLP49748 655 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms