RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MYL3P08590 195 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MYBP10242 640 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PRKAR1AP10644 381 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KRT3P12035 628 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 RARGP13631 454 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CHN1P15882 459 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF18P17022 549 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CDH2P19022 906 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 DNAJB1P25685 340 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PTPN4P29074 926 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PCSK6P29122 969 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MARCKSP29966 332 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 GUCY1A2P33402 732 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 HTR7P34969 479 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 SOX5P35711 763 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 SOX6P35712 828 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 HSD17B3P37058 310 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 GNALP38405 381 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 GP5P40197 560 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PBX1P40424 430 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NPY2RP49146 381 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 FLT3LGP49771 235 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CLCN4P51793 760 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NEK3P51956 506 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 COPB1P53618 953 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 VCPP55072 806 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NLRP11P59045 1033 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 RAB14P61106 215 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MAGOHP61326 146 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CXADRP78310 365 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PHC1P78364 1004 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 OTUD4Q01804 1114 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MEF2AQ02078 507 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ST3GAL1Q11201 340 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CDC16Q13042 620 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TARDBPQ13148 414 aaKnown RBP eCLIP3.74□□□□□ -1.811e-13■■■■■ 43.4
CLNS1A-209ENST00000527299 SNTA1Q13424 505 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 OXA1LQ15070 435 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NADK2Q4G0N4 442 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ANKRD20A4Q4UJ75 823 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KHDC1Q4VXA5 237 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 FNDC3BQ53EP0 1204 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ATXN7L2Q5T6C5 722 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 C6orf163Q5TEZ5 329 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CACHD1Q5VU97 1274 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CFAP161Q6P656 301 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KDELC1Q6UW63 502 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 UGT2A3Q6UWM9 527 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ABHD15Q6UXT9 468 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 IZUMO2Q6UXV1 221 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PDZD4Q76G19 769 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NIPA1Q7RTP0 329 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TAS2R42Q7RTR8 314 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 BNIPLQ7Z465 357 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PDSS2Q86YH6 399 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 HPS6Q86YV9 775 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 GLB1L2Q8IW92 636 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CCDC36Q8IYA8 594 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KIAA2013Q8IYS2 634 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 AHI1Q8N157 1196 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 OR8H2Q8N162 312 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 LIX1Q8N485 282 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MARVELD2Q8N4S9 558 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CAMKK1Q8N5S9 505 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 FITM2Q8N6M3 262 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 VGLL2Q8N8G2 317 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ASCC1Q8N9N2 400 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KBTBD3Q8NAB2 608 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PDPRQ8NCN5 879 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PSD4Q8NDX1 1056 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 OR7D4Q8NG98 312 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NCOA7Q8NI08 942 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 SCFD2Q8WU76 684 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TGFBRAP1Q8WUH2 860 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 SNX33Q8WV41 574 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 KBTBD7Q8WVZ9 684 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 CAPSLQ8WWF8 208 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TRUB1Q8WWH5 349 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TRIB2Q92519 343 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PTPRUQ92729 1446 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 STMN2Q93045 179 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MAGOHBQ96A72 148 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 LRRC59Q96AG4 307 aaKnown RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TAMM41Q96BW9 452 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 OMA1Q96E52 524 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 PGM2Q96G03 612 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TBATAQ96M53 351 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF578Q96N58 590 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ZPBPQ9BS86 351 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 UBAC1Q9BSL1 405 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 MLPHQ9BV36 600 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 HEMGNQ9BXL5 484 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 EDEM3Q9BZQ6 932 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 NT5C3AQ9H0P0 336 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TP63Q9H3D4 680 aaPredicted RBP3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 ARMC7Q9H6L4 198 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 POLD4Q9HCU8 107 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TUFT1Q9NNX1 390 aa3.74□□□□□ -1.81
CLNS1A-209ENST00000527299 TIGARQ9NQ88 270 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms