RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 GKAP1Q5VSY0 366 aaPredicted RBP11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 KIAA1161Q6NSJ0 714 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 DENND1BQ6P3S1 775 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 XKR5Q6UX68 686 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 ATG14Q6ZNE5 492 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 WDR48Q8TAF3 677 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 CCHCR1Q8TD31 782 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 GRK7Q8WTQ7 553 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 IL12RB2Q99665 862 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 BOCQ9BWV1 1114 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 SLC4A5Q9BY07 1137 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 SLC17A9Q9BYT1 436 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 MUC3BQ9H195 1237 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 TBC1D30Q9Y2I9 924 aa11.78□□□□□ -0.52
RPUSD4-203ENST00000526942 K7ERQ8 282 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 RIPK2O43353 540 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 PSTPIP1O43586 416 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 CLDN11O75508 207 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 DRD4P21917 467 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 MMP13P45452 471 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 RPS21P63220 83 aaKnown RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 ELF3P78545 371 aaPredicted RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 CALCOCO2Q13137 446 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 SPIDRQ14159 915 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 SLC29A2Q14542 456 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 TAF5Q15542 800 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 QPCTQ16769 361 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 ARSIQ5FYB1 569 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 TRMT10CQ7L0Y3 403 aaKnown RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 SLC35F3Q8IY50 421 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 STK32AQ8WU08 396 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 RAPGEF5Q92565 580 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 EXTL1Q92935 676 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 NAT6Q93015 286 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 SGF29Q96ES7 293 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 LIN37Q96GY3 246 aaPredicted RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 PPP1R16AQ96I34 528 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 RSRC1Q96IZ7 334 aaKnown RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 CCDC3Q9BQI4 270 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 STMN4Q9H169 189 aaPredicted RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 LRRC4CQ9HCJ2 640 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 HOMER3Q9NSC5 361 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 DDIT4Q9NX09 232 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 IL36AQ9UHA7 158 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 IPO11Q9UI26 975 aaKnown RBP11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 VPS51Q9UID3 782 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.52
RPUSD4-203ENST00000526942 SPINT1O43278 529 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 SUV39H1O43463 412 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 SMAD6O43541 496 aaKnown RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PROSCO94903 275 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 GJB6O95452 261 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ATP6V1G2O95670 118 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PAK4O96013 591 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ITGB2P05107 769 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ITGB6P18564 788 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ITIH2P19823 946 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PAX7P23759 505 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 RPIAP49247 311 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 NEK3P51956 506 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 CDH4P55283 916 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 NOMO3P69849 1222 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 CAV1Q03135 178 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 EIF2B5Q13144 721 aaKnown RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PTK6Q13882 451 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PDE1CQ14123 709 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 KCTD19Q17RG1 926 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 KIF26BQ2KJY2 2108 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 SPRED3Q2MJR0 410 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 USP53Q70EK8 1073 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 C14orf80Q86SX3 495 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 TMEM110Q86TL2 294 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PHF13Q86YI8 300 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 RBFAQ8N0V3 343 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 GLMNQ92990 594 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ARHGAP9Q9BRR9 750 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 C2orf49Q9BVC5 232 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ROPN1BQ9BZX4 212 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 SYNDIG1Q9H7V2 258 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 ROPN1Q9HAT0 212 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 PCDHGA7Q9Y5G6 932 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 FADS3Q9Y5Q0 445 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 WASF2Q9Y6W5 498 aa11.77□□□□□ -0.53
RPUSD4-203ENST00000526942 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 CCT8L1PA6NM43 557 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 NTN3O00634 580 aaPredicted RBP11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 FPGTO14772 594 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 PLD2O14939 933 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 TP73O15350 636 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 RGS16O15492 202 aaPredicted RBP11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 NOBOXO60393 691 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 LEFTY1O75610 366 aa11.76□□□□□ -0.53
RPUSD4-203ENST00000526942 GAS8O95995 478 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms