RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 GPNMBQ14956 572 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 STK38Q15208 465 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 TCTN1Q2MV58 587 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 HYIQ5T013 277 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 RESP18Q5W5W9 173 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ARL6IP4Q66PJ3 421 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 MRNIPQ6NTE8 343 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SLC39A5Q6ZMH5 540 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 PLPPR4Q7Z2D5 763 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 LURAP1LQ8IV03 231 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SMAP1Q8IYB5 467 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 TMEM199Q8N511 208 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ENGASEQ8NFI3 743 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 OR52L2PQ8NGH6 319 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZFPM2Q8WW38 1151 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 GLMPQ8WWB7 406 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ASB12Q8WXK4 309 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 STAMQ92783 540 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 PMM1Q92871 262 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF479Q96JC4 524 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF396Q96N95 335 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 NAP1L4Q99733 375 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SDF4Q9BRK5 362 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 PIMREGQ9BSJ6 248 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 MTG1Q9BT17 334 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 POLR3CQ9BUI4 534 aaPredicted RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 HTATIP2Q9BUP3 242 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 PANK2Q9BZ23 570 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 NUP62CLQ9H1M0 184 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SLCO5A1Q9H2Y9 848 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 XPNPEP1Q9NQW7 623 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF302Q9NR11 478 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 DDX19AQ9NUU7 478 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SETD4Q9NVD3 440 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 HDAC6Q9UBN7 1215 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 LRWD1Q9UFC0 647 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 IPO11Q9UI26 975 aaKnown RBP3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ZDBF2Q9HCK1 2354 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SPTBN4Q9H254 2564 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 SCN1AP35498 2009 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 VWA8A3KMH1 1905 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 ADGRA3Q8IWK6 1321 aa3.19□□□□□ -1.9
CSDE1-208ENST00000524652 COL4A4P53420 1690 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 IGKV6-21A0A0C4DH24 114 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 A0A0U1RQG5 324 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 A0A1W2PPC1 479 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 MBLAC1A4D2B0 266 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 RSPH10B2B2RC85 870 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 AREL1O15033 823 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TSPAN6O43657 245 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 KRT86O43790 486 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 UGDHO60701 494 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 COQ9O75208 318 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 LYPLA2O95372 231 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 C22orf31O95567 290 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 VTNP04004 478 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 RSPH10BP0C881 870 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SMIM10L2AP0DMW4 78 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SMIM10L2BP0DMW5 78 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 PFKFB1P16118 471 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 MT3P25713 68 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 YWHABP31946 246 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SFNP31947 248 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 CCT6AP40227 531 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 QARSP47897 775 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 CLCN3P51790 818 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 NDUFA8P51970 172 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 P2RX3P56373 397 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 PSMC5P62195 406 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 MGAT3Q09327 533 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SEMA3BQ13214 749 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 BFSP2Q13515 415 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 KRT81Q14533 505 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 PTGR1Q14914 329 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ZRSR1Q15695 479 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TMEM266Q2M3C6 531 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 GFOD2Q3B7J2 385 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TRIM60Q495X7 471 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF585BQ52M93 769 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TMEM196Q5HYL7 178 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 PIK3CD-AS1Q5SR53 167 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 FAXCQ5TGI0 409 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ATL3Q6DD88 541 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ADALQ6DHV7 355 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 RINT1Q6NUQ1 792 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ACSM6Q6P461 480 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 KYAT3Q6YP21 454 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 C4orf19Q8IY42 314 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 LAS2Q8IYD9 372 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 DAW1Q8N136 415 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 MYO1HQ8N1T3 1032 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 PDILTQ8N807 584 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ARL14EPQ8N8R7 260 aaPredicted RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 FSIP1Q8NA03 581 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 RDM1Q8NG50 284 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 GPT2Q8TD30 523 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ATP8B4Q8TF62 1192 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms