RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 BOCQ9BWV1 1114 aa9.45□□□□□ -0.9
CLK4-209ENST00000521621 EIF2B3Q9NR50 452 aaKnown RBP9.45□□□□□ -0.9
CLK4-209ENST00000521621 PHPT1Q9NRX4 125 aaPredicted RBP9.45□□□□□ -0.9
CLK4-209ENST00000521621 SMOXQ9NWM0 555 aa9.45□□□□□ -0.9
CLK4-209ENST00000521621 CHKBQ9Y259 395 aa9.45□□□□□ -0.9
CLK4-209ENST00000521621 WDFY4Q6ZS81 3184 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 PNLIPP16233 465 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 DGKAP23743 735 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 FDFT1P37268 417 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 THOP1P52888 689 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 EPHB1P54762 984 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 WNT3AP56704 352 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 CLDN2P57739 230 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 PDE1CQ14123 709 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 ACOX1Q15067 660 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 TRIP6Q15654 476 aaKnown RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 SLC1A5Q15758 541 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 CLPPQ16740 277 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 DARS2Q6PI48 645 aaKnown RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 OGFOD3Q6PK18 319 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 PID1Q7Z2X4 250 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 SLC25A45Q8N413 288 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 TTC30BQ8N4P2 665 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 TRAM1L1Q8N609 369 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 OR6C4Q8NGE1 309 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 PEX13Q92968 403 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 OXNAD1Q96HP4 312 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 WDR24Q96S15 920 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 NAP1L3Q99457 506 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 ZSCAN5AQ9BUG6 496 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 FSCN3Q9NQT6 498 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 TRNAU1APQ9NX07 287 aaKnown RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 RSPH14Q9UHP6 348 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 APOBEC2Q9Y235 224 aaKnown RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 ZNF711Q9Y462 761 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 AP3B1O00203 1094 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 KCNJ13O60928 360 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 MAP3K6O95382 1288 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 CKMT1AP12532 417 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 DUSP3P51452 185 aaPredicted RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 LAMB3Q13751 1172 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 INPP5AQ14642 412 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 ZC3H18Q86VM9 953 aaKnown RBP9.44□□□□□ -0.9
CLK4-209ENST00000521621 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 LPCAT1Q8NF37 534 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 OR56A4Q8NGH8 313 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 WDR26Q9H7D7 661 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 LRRC40Q9H9A6 602 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 ZFYVE1Q9HBF4 777 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 FZD3Q9NPG1 666 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 NEUROG3Q9Y4Z2 214 aa9.44□□□□□ -0.9
CLK4-209ENST00000521621 ZFHX2Q9C0A1 2572 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 PI4KAP42356 2102 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 KLHL33A6NCF5 533 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 SH3BP5O60239 455 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 TNFP01375 233 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 MAGEA6P43360 314 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 HK3P52790 923 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 LRP8Q14114 963 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 SIRPB2Q5JXA9 342 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 CCDC181Q5TID7 509 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 ZCCHC8Q6NZY4 707 aaKnown RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 LINC00523Q86TU6 105 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 C17orf82Q86X59 251 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 ZNF548Q8NEK5 533 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 WDR48Q8TAF3 677 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 GPBAR1Q8TDU6 330 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 KLK6Q92876 244 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 SGSM3Q96HU1 749 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 RANBP9Q96S59 729 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 LZTFL1Q9NQ48 299 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 TOR4AQ9NXH8 423 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 FTSJ1Q9UET6 329 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 COL27A1Q8IZC6 1860 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 GVINP1Q7Z2Y8 2422 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 AGAP14A8MT82 685 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 KCNN4O15554 427 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 AQP9O43315 295 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 NOVA1P51513 510 aaKnown RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 SRP54P61011 504 aaKnown RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 CDK3Q00526 305 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 E2F1Q01094 437 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 PPARDQ03181 441 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 SEMA5AQ13591 1074 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 ELOCQ15369 112 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 TAF1AQ15573 450 aaPredicted RBP9.43□□□□□ -0.9
CLK4-209ENST00000521621 ALG11Q2TAA5 492 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 TPRG1LQ5T0D9 272 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 AADACL2Q6P093 401 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 TSPAN33Q86UF1 283 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 GLMNQ92990 594 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 HIC2Q96JB3 615 aa9.43□□□□□ -0.9
CLK4-209ENST00000521621 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms