RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RAB26Q9ULW5 256 aa12.12□□□□□ -0.47
ERGIC1-208ENST00000520399 COL1A2P08123 1366 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 G3V2T6 193 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 TLX1P31314 330 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 IKBKEQ14164 716 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 RAP1GAP2Q684P5 730 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF248Q8NDW4 579 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 VPS35Q96QK1 796 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 RNF19AQ9NV58 838 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PTGFRNQ9P2B2 879 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 OPTCQ9UBM4 332 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 GPN3Q9UHW5 284 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 FBXL21Q9UKT6 434 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 H7C2Y5 167 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 RPL22P35268 128 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 GRM5P41594 1212 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 USP41Q3LFD5 358 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 HTRA1Q92743 480 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 HSD17B14Q9BPX1 270 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 AIFM2Q9BRQ8 373 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 GPN1Q9HCN4 374 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 POLR3BQ9NW08 1133 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PDE2AO00408 941 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 CRYBB1P53674 252 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC5A3P53794 718 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 MPP2Q14168 576 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 INO80DQ53TQ3 878 aaPredicted RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 TCEAL6Q6IPX3 200 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 AFTPHQ6ULP2 937 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 FAM13CQ8NE31 585 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 KBTBD8Q8NFY9 601 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC38A2Q96QD8 506 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC25A23Q9BV35 468 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PRDM8Q9NQV8 689 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 NUP50Q9UKX7 468 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 DERAQ9Y315 318 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 TNPO3Q9Y5L0 923 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ZBTB14O43829 449 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 YES1P07947 543 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PRKAR1AP10644 381 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 NEK3P51956 506 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ACTR3P61158 418 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 FRG1Q14331 258 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 CRY1Q16526 586 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 IL27RAQ6UWB1 636 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 C4orf32Q8N8J7 132 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ZYG11BQ9C0D3 744 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 TOR4AQ9NXH8 423 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 NUDT5Q9UKK9 219 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 UBR1Q8IWV7 1749 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 RCCD1A6NED2 376 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 DGKZQ13574 1117 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PYDC1Q8WXC3 89 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 TRIM2Q9C040 744 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 PLK2Q9NYY3 685 aa12.11□□□□□ -0.47
ERGIC1-208ENST00000520399 MCIDASD6RGH6 385 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 PIGNO95427 931 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 LDLRP01130 860 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 LINGO3P0C6S8 592 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 ME2P23368 584 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 ADSSP30520 456 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 MAPK12P53778 367 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 BICRALQ6AI39 1079 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 ANO7Q6IWH7 933 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 C16orf46Q6P387 395 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 ARMC8Q8IUR7 673 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 AP3S1Q92572 193 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 TRAV19A0A0A6YYK7 116 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 I3L521 148 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 KCNH1O95259 989 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 CCNE2O96020 404 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 CCNB1P14635 433 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 RPL4P36578 427 aaKnown RBP12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 CD97P48960 835 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 INHBEP58166 350 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 SETMARQ53H47 684 aaPredicted RBP12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 C1orf189Q5VU69 101 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 SATL1Q86VE3 508 aa12.1□□□□□ -0.47
ERGIC1-208ENST00000520399 DPF3Q92784 378 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms