RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SCAMP3O14828 347 aaKnown RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 PENKP01210 267 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 ALDH1A3P47895 512 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 ARF5P84085 180 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 NFKB2Q00653 900 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 ILF2Q12905 390 aaKnown RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 PDAP1Q13442 181 aaKnown RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 TAF12Q16514 161 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 CLEC6AQ6EIG7 209 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 LINGO4Q6UY18 593 aa25.71■■□□□ 1.71
COL13A1-213ENST00000520267 INTS10Q9NVR2 710 aaKnown RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 ARIH1Q9Y4X5 557 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-213ENST00000520267 COL4A6Q14031 1691 aa25.7■■□□□ 1.71
COL13A1-213ENST00000520267 SMIM24O75264 130 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 CD160O95971 181 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 ENO3P13929 434 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-213ENST00000520267 FMO4P31512 558 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 TRMOQ9BU70 441 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 RAI2Q9Y5P3 530 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 SNAP91O60641 907 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 CDKN1CP49918 316 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-213ENST00000520267 HERVK_113P63132 956 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 PTPRRQ15256 657 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 SETMARQ53H47 684 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-213ENST00000520267 AFTPHQ6ULP2 937 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 BNC2Q6ZN30 1099 aaPredicted RBP25.7■■□□□ 1.7
COL13A1-213ENST00000520267 GK5Q6ZS86 529 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 DHDDSQ86SQ9 333 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 HMGCLL1Q8TB92 370 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 NPAS2Q99743 824 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 ERVK-6Q9BXR3 956 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 STK39Q9UEW8 545 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 MED16Q9Y2X0 877 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 TRIM17Q9Y577 477 aa25.7■■□□□ 1.7
COL13A1-213ENST00000520267 UBXN8O00124 270 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 LIN7AO14910 233 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-213ENST00000520267 CFLARO15519 480 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 SOD2P04179 222 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 DPP6P42658 865 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 INHBCP55103 352 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 CDH13P55290 713 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 PRMT2P55345 433 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 SPOUT1Q5T280 376 aaKnown RBP25.69■■□□□ 1.7
COL13A1-213ENST00000520267 IZUMO2Q6UXV1 221 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 PTGR2Q8N8N7 351 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-213ENST00000520267 LPGAT1Q92604 370 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 EFCAB1Q9HAE3 211 aa25.69■■□□□ 1.7
COL13A1-213ENST00000520267 LRRC14BA6NHZ5 514 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 RHOBTB1O94844 696 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 SIX3O95343 332 aaPredicted RBP25.68■■□□□ 1.7
COL13A1-213ENST00000520267 MTHFD2P13995 350 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 THOP1P52888 689 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 CYHR1Q6ZMK1 362 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 PGAM4Q8N0Y7 254 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 TRMT2BQ96GJ1 504 aaKnown RBP25.68■■□□□ 1.7
COL13A1-213ENST00000520267 CYP2S1Q96SQ9 504 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 SERPINI1Q99574 410 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 WDR41Q9HAD4 459 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 HSFX1Q9UBD0 423 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 ADAMTS6Q9UKP5 1117 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 C2orf81A6NN90 581 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 C1RP00736 705 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 ART3Q13508 389 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 ARHGEF6Q15052 776 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 PIGGQ5H8A4 983 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 TPGS2Q68CL5 300 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 PAQR3Q6TCH7 311 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 KBTBD6Q86V97 674 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 UCMAQ8WVF2 138 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 ATOH8Q96SQ7 321 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 FAM50BQ9Y247 325 aa25.68■■□□□ 1.7
COL13A1-213ENST00000520267 TMCC1O94876 653 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 HSPA1AP0DMV8 641 aaKnown RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 HSPA1BP0DMV9 641 aaKnown RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 PSMA3P25788 255 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 PKNOX1P55347 436 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 TRAF2Q12933 501 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 ZNF423Q2M1K9 1284 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 TMCO2Q7Z6W1 182 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 USP13Q92995 863 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 PAK6Q9NQU5 681 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 VPS28Q9UK41 221 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 IKZF3Q9UKT9 509 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 H3BNX3 289 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 STX16-NPEPL1H3BU86 382 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 PPP6CO00743 305 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 UBDO15205 165 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 SMNDC1O75940 238 aaKnown RBP eCLIP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 SRP72O76094 671 aaKnown RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 MBL2P11226 248 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 MZF1P28698 734 aaPredicted RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 SH3BP2P78314 561 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 TWF1Q12792 350 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 CEACAM7Q14002 265 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 PFKFB4Q16877 469 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 TMEM150AQ86TG1 271 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 CARNMT1Q8N4J0 409 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 RHEBL1Q8TAI7 183 aa25.67■■□□□ 1.7
COL13A1-213ENST00000520267 ZFRQ96KR1 1074 aaKnown RBP25.67■■□□□ 1.7
COL13A1-213ENST00000520267 ECSITQ9BQ95 431 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms