RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 S100A9P06702 114 aaKnown RBP6.03□□□□□ -1.44
SQLE-203ENST00000518931 TPBGLP0DKB5 382 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 HOXC8P31273 242 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ABCG1P45844 678 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 HSD17B4P51659 736 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 RIPK4P57078 832 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 MRPS5P82675 430 aaKnown RBP6.03□□□□□ -1.44
SQLE-203ENST00000518931 TEFQ10587 303 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ARHGEF6Q15052 776 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
SQLE-203ENST00000518931 CENPPQ6IPU0 288 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ZNF813Q6ZN06 617 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 TAF8Q7Z7C8 310 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 SPATA24Q86W54 205 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 RFX6Q8HWS3 928 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 CDH26Q8IXH8 852 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 SRRM1Q8IYB3 904 aaKnown RBP6.03□□□□□ -1.44
SQLE-203ENST00000518931 AGR3Q8TD06 166 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ZNF398Q8TD17 642 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 WDR60Q8WVS4 1066 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 MCRS1Q96EZ8 462 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 SEMA4CQ9C0C4 833 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 NUAK2Q9H093 628 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 WNT5BQ9H1J7 359 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ISCUQ9H1K1 167 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 TAOK3Q9H2K8 898 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 CHODLQ9H9P2 273 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 VEZTQ9HBM0 779 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 G6PC2Q9NQR9 355 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ABCB8Q9NUT2 735 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 FBXO28Q9NVF7 368 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 APPL1Q9UKG1 709 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 RCOR1Q9UKL0 485 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 HSF4Q9ULV5 492 aa6.03□□□□□ -1.44
SQLE-203ENST00000518931 ARHGEF37A1IGU5 675 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 VWA3AA6NCI4 1184 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 ZSCAN5CA6NGD5 496 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 GLOD5A6NK44 160 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 C16orf96A6NNT2 1141 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 FAM86B1E9PN63 330 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 DNM1LO00429 736 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 DYNC1I1O14576 645 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 POLR2DO15514 142 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 ENTPD3O75355 529 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 FGFR1OPO95684 399 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 HMOX1P09601 288 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 EPHB2P29323 1055 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 PPARGP37231 505 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 HARS2P49590 506 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 POLGP54098 1239 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 ATXN3P54252 364 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 NPRL3Q12980 569 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 GAB1Q13480 694 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 CAPSQ13938 189 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 CAMK1Q14012 370 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 MEP1BQ16820 701 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 MYLK3Q32MK0 819 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SLC39A12Q504Y0 691 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 ZNF628Q5EBL2 1059 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 NHSL2Q5HYW2 709 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SHEQ5VZ18 495 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 KLC3Q6P597 504 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 C16orf89Q6UX73 402 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 ATG9AQ7Z3C6 839 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 MIER3Q7Z3K6 550 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 YTHDF3Q7Z739 585 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 ADGRG6Q86SQ4 1221 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 ADGRF2Q8IZF7 708 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 GALNT16Q8N428 558 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 FRMD1Q8N878 549 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SYT2Q8N9I0 419 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 FAM184AQ8NB25 1140 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SLC4A11Q8NBS3 891 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 OR52L2PQ8NGH6 319 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 PRPF31Q8WWY3 499 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 RAPGEF5Q92565 580 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 MR1Q95460 341 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 LRRC59Q96AG4 307 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 FER1L6-AS2Q96M78 137 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 RUFY1Q96T51 708 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 GAL3ST1Q99999 423 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 TUBA1CQ9BQE3 449 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 PAAF1Q9BRP4 392 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 KLHL4Q9C0H6 718 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SLC5A7Q9GZV3 580 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 USP44Q9H0E7 712 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 TP63Q9H3D4 680 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 HOMER3Q9NSC5 361 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 DONSONQ9NYP3 566 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 CNOT7Q9UIV1 285 aaKnown RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 CORO1CQ9ULV4 474 aaPredicted RBP6.02□□□□□ -1.45
SQLE-203ENST00000518931 PCDHGA1Q9Y5H4 931 aa6.02□□□□□ -1.45
SQLE-203ENST00000518931 SMIM35A0A1B0GVV1 85 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 TTC34A8MYJ7 566 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 PRPF4O43172 522 aaKnown RBP eCLIP6.01□□□□□ -1.45
SQLE-203ENST00000518931 RNF8O76064 485 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 PRR35P0CG20 571 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 GHRP10912 638 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 MATN1P21941 496 aa6.01□□□□□ -1.45
SQLE-203ENST00000518931 JAK1P23458 1154 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms