RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CCNHP51946 323 aaPredicted RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAXP61244 160 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SNRPNP63162 240 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OTUD4Q01804 1114 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZBTB16Q05516 673 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PPIDQ08752 370 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NSUN2Q08J23 767 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CCDC15Q0P6D6 951 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SRSF5Q13243 272 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HNRNPDQ14103 355 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 MAP7Q14244 749 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CST6Q15828 149 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF528Q3MIS6 628 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TTC31Q49AM3 519 aaPredicted RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TRIM61Q5EBN2 209 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GTF2IRD2BQ6EKJ0 949 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CDPF1Q6NVV7 123 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DARS2Q6PI48 645 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZC3H14Q6PJT7 736 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SHISA2Q6UWI4 295 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BBS12Q6ZW61 710 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CEP68Q76N32 757 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SRLQ86TD4 932 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GTF2IRD2Q86UP8 949 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FAM124AQ86V42 546 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 WDR5BQ86VZ2 330 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RASSF3Q86WH2 238 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SLC13A5Q86YT5 568 aaPredicted RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HDDC3Q8N4P3 179 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DEFB119Q8N690 84 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FRMD1Q8N878 549 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TMIEQ8NEW7 156 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OR2AP1Q8NGE2 309 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OR2A12Q8NGT7 310 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PIP4K2CQ8TBX8 421 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TFB1MQ8WVM0 346 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ISG20Q96AZ6 181 aaKnown RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GDAP1L1Q96MZ0 367 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZNF599Q96NL3 588 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TSGA13Q96PP4 275 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FAM118BQ9BPY3 351 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TLR10Q9BXR5 811 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BRD8Q9H0E9 1235 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RSPH9Q9H1X1 276 aaPredicted RBP5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NEUROG2Q9H2A3 272 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C10orf88Q9H8K7 445 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TRIM39Q9HCM9 518 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CD248Q9HCU0 757 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 NT5MQ9NPB1 228 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DYRK4Q9NR20 520 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FBXL12Q9NXK8 326 aa5.86□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TCRBV7S2A1N4TA0A589 114 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BLACEA4D250 179 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FAM47DPA6NHR8 397 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HACD1B0YJ81 288 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 APOC4-APOC2K7ER74 178 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ALOX15BO15296 676 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GJB3O75712 270 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RPP40O75818 363 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PEX11BO96011 259 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 APOC2P02655 101 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 FGGP02679 453 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ATP1A1P05023 1023 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 UGT2B4P06133 528 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CTSLP07711 333 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RBP3P10745 1247 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 C5AR1P21730 350 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 XPAP23025 273 aaPredicted RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RBL1P28749 1068 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PMLP29590 882 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CD6P30203 668 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HOXC12P31275 282 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CNR2P34972 360 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 HSPA9P38646 679 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 RGRP47804 291 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TPMTP51580 245 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 EIF3EP60228 445 aaKnown RBP5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GABREP78334 506 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 BCL2L1Q07817 233 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CNTN1Q12860 1018 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 XRCC4Q13426 336 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 SNX1Q13596 522 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 LPAL2Q16609 132 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TEX44Q53QW1 395 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CFAP58Q5T655 872 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 DCAF12L1Q5VU92 463 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 GDPD4Q6W3E5 623 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PRR23BQ6ZRT6 265 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PID1Q7Z2X4 250 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 STRA8Q7Z7C7 330 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TTC7BQ86TV6 843 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 KBTBD6Q86V97 674 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 CAMK1DQ8IU85 385 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 PGBD5Q8N414 524 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 AFAP1L2Q8N4X5 818 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 TEX26Q8N6G2 289 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 ZBTB44Q8NCP5 570 aa5.85□□□□□ -1.47
SCARNA6.1-201ENST00000516989 OR14C36Q8NHC7 312 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms