RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 SPATA31A7Q8IWB4 1347 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SHROOM4Q9ULL8 1493 aa0.29□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CFAP65Q6ZU64 1925 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TDRD6O60522 2096 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A0A1W2PP11 408 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A0A1W2PQF6 199 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TYW5A2RUC4 315 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SH2D7A6NKC9 451 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 A6NL46 340 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TTC34A8MYJ7 566 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SMIM1B2RUZ4 78 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 G3V2L1 256 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PI4K2BG5E9Z4 385 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM189-UBE2V1I3L0A0 370 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 J3QR06 171 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EIF3FO00303 357 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DNM1LO00429 736 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ACOT8O14734 319 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PHOX2AO14813 284 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FRS3O43559 492 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PCDH7O60245 1069 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CTSVO60911 334 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PPFIA4O75335 1185 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRMUO75648 421 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM155BO75949 473 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CLSTN1O94985 981 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OAZ2O95190 189 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SERPINC1P01008 464 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT6AP02538 564 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ALDOAP04075 364 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT6BP04259 564 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATP1A1P05023 1023 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ICAM1P05362 532 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RPLP2P05387 115 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LIPFP07098 398 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC3A2P08195 630 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HNRNPA1P09651 372 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM157CP0CG43 387 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PRSS56P0CW18 603 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IGHV4-30-4P0DP06 118 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRCP12931 536 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GATA1P15976 413 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AGAP20933 346 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DNASE1P24855 282 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HRH2P25021 359 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BDKRB2P30411 391 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FMO4P31512 558 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ADD2P35612 726 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HMGCLP35914 325 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMPOP42166 694 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TECP42680 631 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KRT6CP48668 564 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FMO5P49326 533 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AMPHP49418 695 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HARS2P49590 506 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLCD1P51178 756 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PGGT1BP53609 377 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CACNB3P54284 484 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC12A2P55011 1212 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBX4P57082 545 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TLE3Q04726 772 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM27E3Q08E93 113 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF415Q09FC8 603 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GPR17Q13304 367 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 UBE2V1Q13404 147 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DRP2Q13474 957 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DCTN2Q13561 401 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NAE1Q13564 534 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC12A1Q13621 1099 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GTF2H2Q13888 395 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CAMK1Q14012 370 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FRG1Q14331 258 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NEDD9Q14511 834 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 E2F5Q15329 346 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OASLQ15646 514 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SMAD1Q15797 465 aaKnown RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EXT1Q16394 746 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PNLIPRP3Q17RR3 467 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AMZ1Q400G9 498 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZACNQ401N2 412 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRIM60Q495X7 471 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZC2HC1CQ53FD0 456 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SIRPB2Q5JXA9 342 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPDYCQ5MJ68 293 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CBWD5Q5RIA9 395 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ADAMTSL4-AS1Q5T5F5 129 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LCE1CQ5T751 118 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM69AQ5T7M9 428 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TEDDM1Q5T9Z0 273 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZC2HC1BQ5TFG8 222 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM268Q5VZI3 342 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANO1Q5XXA6 986 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C18orf63Q68DL7 685 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PWWP2BQ6NUJ5 590 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF774Q6NX45 483 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TTI2Q6NXR4 508 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GTF2H2CQ6P1K8 395 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NFRKBQ6P4R8 1299 aa0.28□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CORO6Q6QEF8 472 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms