RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CIDEAO60543 219 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 MMP2P08253 660 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 G6PDP11413 515 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 ETFAP13804 333 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 GALNT1Q10472 559 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-211ENST00000514893 CCDC96Q2M329 555 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 TMEM35AQ53FP2 167 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 LIN54Q6MZP7 749 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 MOB3CQ70IA8 216 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 KIAA2013Q8IYS2 634 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 DDHD1Q8NEL9 900 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 PIGTQ969N2 578 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 TWNKQ96RR1 684 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 CHODLQ9H9P2 273 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 MKKSQ9NPJ1 570 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-211ENST00000514893 STON1Q9Y6Q2 735 aa3.46□□□□□ -1.86
NEDD4-211ENST00000514893 CTAGE9A4FU28 777 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 ZNHIT1O43257 154 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 SRSF10O75494 262 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 CTAGE8P0CG41 777 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 CST5P28325 142 aaPredicted RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 PDIA3P30101 505 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 BDKRB2P30411 391 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 EIF2S3P41091 472 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 RPL24P83731 157 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 PUM3Q15397 648 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 TANGO2Q6ICL3 276 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 ANKRD54Q6NXT1 300 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 CTAGE4Q8IX94 777 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 BEST2Q8NFU1 509 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 RAB40AQ8WXH6 277 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 MOCOSQ96EN8 888 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 SIN3AQ96ST3 1273 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 CMKLR1Q99788 373 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 CABLES2Q9BTV7 478 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 ESRP2Q9H6T0 727 aaKnown RBP3.45□□□□□ -1.86
NEDD4-211ENST00000514893 BARHL2Q9NY43 387 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 RASAL2Q9UJF2 1139 aa3.45□□□□□ -1.86
NEDD4-211ENST00000514893 ACKR2O00590 384 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 ANP32CO43423 234 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 CD48P09326 243 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 GATA1P15976 413 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 AARSP49588 968 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 TECRLQ5HYJ1 363 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 METTL2BQ6P1Q9 378 aaKnown RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 RBMS3Q6XE24 437 aaKnown RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 ARHGEF26Q96DR7 871 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 METTL2AQ96IZ6 378 aaKnown RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 C8orf48Q96LL4 319 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 RMDN3Q96TC7 470 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 PLEKHA4Q9H4M7 779 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 BICC1Q9H694 974 aaKnown RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 NLRC4Q9NPP4 1024 aa3.44□□□□□ -1.86
NEDD4-211ENST00000514893 TTC7AQ9ULT0 858 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 MRPS28Q9Y2Q9 187 aaKnown RBP3.44□□□□□ -1.86
NEDD4-211ENST00000514893 SH2D7A6NKC9 451 aaPredicted RBP3.43□□□□□ -1.86
NEDD4-211ENST00000514893 A8MU10 97 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 ZNF23P17027 643 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 MAOAP21397 527 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 METAP2P50579 478 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEDD4-211ENST00000514893 CLDN2P57739 230 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 RUNX1T1Q06455 604 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 CHRNDQ07001 517 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 TUBB2AQ13885 445 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 IL31Q6EBC2 164 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 OR7E24Q6IFN5 339 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 TRIM65Q6PJ69 517 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 LINGO2Q7L985 606 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 FCAMRQ8WWV6 532 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 QRFPRQ96P65 431 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 TUBB2BQ9BVA1 445 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 SLC32A1Q9H598 525 aa3.43□□□□□ -1.86
NEDD4-211ENST00000514893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.43□□□□□ -1.86
NEDD4-211ENST00000514893 A0A087X002 238 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 CLIC2O15247 247 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 CTSVO60911 334 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 FAM106CPP0CH98 169 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 AGAP20933 346 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 AMPHP49418 695 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 EIF2S3LQ2VIR3 472 aaKnown RBP3.42□□□□□ -1.86
NEDD4-211ENST00000514893 CTXN3Q4LDR2 81 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 CPLX2Q6PUV4 134 aaKnown RBP3.42□□□□□ -1.86
NEDD4-211ENST00000514893 C17orf99Q6UX52 265 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 OR52I2Q8NH67 350 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 LINGO1Q96FE5 620 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 CD180Q99467 661 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.42□□□□□ -1.86
NEDD4-211ENST00000514893 TWSG1Q9GZX9 223 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 SAYSD1Q9NPB0 183 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 ADPRHL2Q9NX46 363 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 FBXO9Q9UK97 447 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-211ENST00000514893 DERAQ9Y315 318 aa3.42□□□□□ -1.86
NEDD4-211ENST00000514893 PABPN1LA6NDY0 278 aaKnown RBP3.41□□□□□ -1.86
NEDD4-211ENST00000514893 TMEM202A6NGA9 273 aa3.41□□□□□ -1.86
NEDD4-211ENST00000514893 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
NEDD4-211ENST00000514893 POLR2CP19387 275 aaPredicted RBP3.41□□□□□ -1.86
NEDD4-211ENST00000514893 ICA1Q05084 483 aa3.41□□□□□ -1.86
NEDD4-211ENST00000514893 FOXO1Q12778 655 aa3.41□□□□□ -1.86
NEDD4-211ENST00000514893 SLC45A4Q5BKX6 768 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms