RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 BNIP2Q12982 314 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 TCEA2Q15560 299 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 ANKS6Q68DC2 871 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 OGFOD2Q6N063 350 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 MON1AQ86VX9 555 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 TRIM69Q86WT6 500 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 ZDHHC13Q8IUH4 622 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 FNDC5Q8NAU1 212 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 GRPEL2Q8TAA5 225 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 NTPCRQ9BSD7 190 aaKnown RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 FZD8Q9H461 694 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 MINDY3Q9H8M7 445 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 MTF2Q9Y483 593 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 ASPAP45381 313 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 BNC1Q01954 994 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 DGCR6Q14129 220 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 PLCL1Q15111 1095 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 TREML1Q86YW5 311 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 METTL6Q8TCB7 284 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 DENND1AQ8TEH3 1009 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 DCAKDQ8WVC6 231 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 PCDHGC3Q9UN70 934 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 OXSR1O95747 527 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 CYP1A1P04798 512 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 GPC1P35052 558 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 NAGLUP54802 743 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 CERCAMQ5T4B2 595 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 DNAJC14Q6Y2X3 702 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 PAGE2Q7Z2X7 111 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 KCTD4Q8WVF5 259 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 MLPHQ9BV36 600 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-213ENST00000514442 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 SNX10Q9Y5X0 201 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 RGPD1P0DJD0 1748 aa13.14□□□□□ -0.31
TCOF1-213ENST00000514442 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 OR56A5P0C7T3 313 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 TSPAN8P19075 237 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CDKN2BP42772 138 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 TRIM32Q13049 653 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ZHX1-C8orf76Q96EF9 292 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 HEPHQ9BQS7 1158 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 NFKBIZQ9BYH8 718 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ASB8Q9H765 288 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 SPEF1Q9Y4P9 236 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 C5P01031 1676 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CYP2A7P20853 494 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 GABRR2P28476 465 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 OTOP3Q7RTS5 596 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ALDH16A1Q8IZ83 802 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CLEC4CQ8WTT0 213 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 GAB3Q8WWW8 586 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 MTFMTQ96DP5 389 aaKnown RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 RNF38Q9H0F5 515 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 MRPS23Q9Y3D9 190 aaKnown RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 RAD54BQ9Y620 910 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 MYH7BA7E2Y1 1941 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 A0A088AWK7 358 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 M0QX08 132 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 HS6ST1O60243 411 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ATXN1P54253 815 aaKnown RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 TYSND1Q2T9J0 566 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 TNS4Q8IZW8 715 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ZNF420Q8TAQ5 688 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CCDC106Q9BWC9 280 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 RMND5AQ9H871 391 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CAB39LQ9H9S4 337 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 F8W810 466 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 GSTT2BP0CG30 244 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 MAPK1P28482 360 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 PFKPQ01813 784 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 ZNF697Q5TEC3 545 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 DRICH1Q6PGQ1 229 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 USP45Q70EL2 814 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 CENPLQ8N0S6 344 aaPredicted RBP13.13□□□□□ -0.31
TCOF1-213ENST00000514442 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 PLD5Q8N7P1 536 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 OR2T34Q8NGX1 318 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 OR2T3Q8NH03 318 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 MTERF3Q96E29 417 aa13.13□□□□□ -0.31
TCOF1-213ENST00000514442 A0A087X1B8 175 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms