RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 DCXO43602 365 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 SASH3O75995 380 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 C1SP09871 688 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ERVK-10P10266 1014 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ACADMP11310 421 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 GABRG2P18507 467 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 MAGEA9P43362 315 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ARSDP51689 593 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PTPN5P54829 565 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 TMPRSS15P98073 1019 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 SEMG2Q02383 582 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PTSQ03393 145 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ZNF844Q08AG5 666 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 THOC5Q13769 683 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 GAS6Q14393 721 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PTPRCAPQ14761 206 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 EFTUD2Q15029 972 aaKnown RBP eCLIP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 TMEM52BQ4KMG9 183 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 LIPIQ6XZB0 460 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CNTN4Q8IWV2 1026 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CTAGE3PQ8IX95 158 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 LMNTD2Q8IXW0 634 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CBARPQ8N350 705 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 FLCNQ8NFG4 579 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 TSTD1Q8NFU3 115 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 OR6P1Q8NGX9 317 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CALML6Q8TD86 181 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CXorf40AQ8TE69 158 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 GANCQ8TET4 914 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 EDAQ92838 391 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 HDAC10Q969S8 669 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CDKN2AIPNLQ96HQ2 116 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PKNOX2Q96KN3 472 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 TBATAQ96M53 351 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PLEKHG4BQ96PX9 1271 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 UHRF1Q96T88 793 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 PAFAH2Q99487 392 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ROPN1BQ9BZX4 212 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CDH19Q9H159 772 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 SLC6A17Q9H1V8 727 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 ROPN1Q9HAT0 212 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 BPIFA1Q9NP55 256 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 FBXL12Q9NXK8 326 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 IL1RAPL1Q9NZN1 696 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 VPS18Q9P253 973 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 NFKBIL1Q9UBC1 381 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 SERGEFQ9UGK8 458 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 SLC24A2Q9UI40 661 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 FKBPLQ9UIM3 349 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 GGT7Q9UJ14 662 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 APPL1Q9UKG1 709 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 NCKAP1Q9Y2A7 1128 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 FADS3Q9Y5Q0 445 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 IKBKGQ9Y6K9 419 aa10.88□□□□□ -0.67
POLR2J3-214ENST00000508910 CCDC162PA2VCL2 907 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 POC1B-GALNT4F8VUJ3 575 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 RASGRF2O14827 1237 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 TSPAN6O43657 245 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 PLRG1O43660 514 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 CDH16O75309 829 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 GOT2P00505 430 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 INHBAP08476 426 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 BPIP17213 487 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 MC4RP32245 332 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SPAM1P38567 509 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 MSH2P43246 934 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SPINT3P49223 89 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 LIG3P49916 1009 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 DCDC1P59894 354 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SMAD1Q15797 465 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 KRT71Q3SY84 523 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 HSP90AA5PQ58FG0 334 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 CEP85LQ5SZL2 805 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 ZNF470Q6ECI4 717 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 MRNIPQ6NTE8 343 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 NEPROQ6NW34 567 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 KIAA0408Q6ZU52 694 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 HSD11B1LQ7Z5J1 315 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SLC26A11Q86WA9 606 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 TDRPQ86YL5 185 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 CNPY4Q8N129 248 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 RIBC1Q8N443 379 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SPEM1Q8N4L4 309 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 OTUD6BQ8N6M0 293 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 PPM1NQ8N819 430 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 OR4L1Q8NH43 312 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 EPS8L3Q8TE67 593 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 HMGB4Q8WW32 186 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SLC44A1Q8WWI5 657 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SCG3Q8WXD2 468 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SGSM3Q96HU1 749 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 WRAP53Q9BUR4 548 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SUDS3Q9H7L9 328 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 SMYD2Q9NRG4 433 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 IARS2Q9NSE4 1012 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 CATSPERZQ9NTU4 200 aa10.87□□□□□ -0.67
POLR2J3-214ENST00000508910 BCCIPQ9P287 314 aaKnown RBP eCLIP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms