RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 C1orf127Q8N9H9 656 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 UBASH3BQ8TF42 649 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 SPACA7Q96KW9 195 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 ARL8BQ9NVJ2 186 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 MSI1O43347 362 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 AP2A1O95782 977 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 IFNA16P05015 189 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 YBEYP58557 167 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 RNASEH2BQ5TBB1 312 aaKnown RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 MZT2BQ6NZ67 158 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 GPR152Q8TDT2 470 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 OR8D1Q8WZ84 308 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 ZNF607Q96SK3 696 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 DNAJC28Q9NX36 388 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 POLR3HQ9Y535 204 aaPredicted RBP16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 AP4B1Q9Y6B7 739 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 COMMD3-BMI1R4GMX3 469 aa16.53■□□□□ 0.24
PCDHA1-203ENST00000504120 PKMP14618 531 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 KLF10Q13118 480 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 UBE2R2Q712K3 238 aaPredicted RBP16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 TBC1D21Q8IYX1 336 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 WDR60Q8WVS4 1066 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 GINS4Q9BRT9 223 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 CLK4Q9HAZ1 481 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 NID2Q14112 1375 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 A0A0J9YYE9 177 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 DHX15O43143 795 aaKnown RBP16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 ELFN1P0C7U0 828 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 CXCR3P49682 368 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 MTAPQ13126 283 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 ITGADQ13349 1161 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 QPCTQ16769 361 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 FNBP1LQ5T0N5 605 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 CLNKQ7Z7G1 428 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 ZFYVE1Q9HBF4 777 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 C8orf4Q9NR00 106 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 MFHAS1Q9Y4C4 1052 aa16.52■□□□□ 0.24
PCDHA1-203ENST00000504120 SUV39H1O43463 412 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 TSPAN1O60635 241 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 DPYSQ14117 519 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 TIGD2Q4W5G0 525 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 PMF1Q6P1K2 205 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 RERGQ96A58 199 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 ERLEC1Q96DZ1 483 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 SSU72Q9NP77 194 aaKnown RBP16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 AKAP7Q9P0M2 348 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 IGLV3-22A0A075B6J6 115 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 SNPHO15079 494 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 PGM3O95394 542 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 ZNF37AP17032 561 aaPredicted RBP16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 MPSTP25325 297 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 STAT5AP42229 794 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC47A1Q96FL8 570 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 EPB41L1Q9H4G0 881 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 SOHLH2Q9NX45 425 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 KCTD5Q9NXV2 234 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 ASF1AQ9Y294 204 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.23
PCDHA1-203ENST00000504120 GRM6O15303 877 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 OR10H2O60403 315 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NDST3O95803 873 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GABRR2P28476 465 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SPIBQ01892 262 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 DUSP4Q13115 394 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 METTL21CQ5VZV1 264 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NEK5Q6P3R8 708 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 IKBIPQ70UQ0 350 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 OTOP3Q7RTS5 596 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 IZUMO1Q8IYV9 350 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 ASZ1Q8WWH4 475 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 PPCDCQ96CD2 204 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NPAS2Q99743 824 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 FNDC11Q9BVV2 318 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SDCBP2Q9H190 292 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 FBXL21Q9UKT6 434 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 E9PAM4 449 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GCATO75600 419 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NDUFAF6Q330K2 333 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 FAM220AQ7Z4H9 259 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 PQLC1Q8N2U9 271 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 TRIT1Q9H3H1 467 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC27A6Q9Y2P4 619 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 NPEPPSL1A6NEC2 478 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 CHURC1-FNTBB4DL54 471 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 GSC2O15499 205 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 MFN2O95140 757 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 ADH1CP00326 375 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 HLA-DQA2P01906 255 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC6A2P23975 617 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 HADHBP55084 474 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 RGS21Q2M5E4 152 aa16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 KIAA1324Q6UXG2 1013 aaKnown RBP16.51■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC24A5Q71RS6 500 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms