RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 PCSK1P29120 753 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 GJA5P36382 358 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 CRYBB1P53674 252 aaPredicted RBP24.49■■□□□ 1.51
DDX41-202ENST00000503078 ADAM17P78536 824 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 GRB7Q14451 532 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 TMTC4Q5T4D3 741 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 ARTNQ5T4W7 220 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 LYSMD3Q7Z3D4 306 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 PIM3Q86V86 326 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 PHYKPLQ8IUZ5 450 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 SCML4Q8N228 414 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 KLHL23Q8NBE8 558 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 TRPV3Q8NET8 790 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 OR6P1Q8NGX9 317 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 TWIST2Q8WVJ9 160 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 SNRNP27Q8WVK2 155 aaKnown RBP24.49■■□□□ 1.51
DDX41-202ENST00000503078 CYGBQ8WWM9 190 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 LRRC58Q96CX6 371 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 TRIM62Q9BVG3 475 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 MID1IP1Q9NPA3 183 aa24.49■■□□□ 1.51
DDX41-202ENST00000503078 MEIS3P2A8K0S8 358 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 ACOX3O15254 700 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 MATN4O95460 622 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 GPIP06744 558 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 BDNFP23560 247 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 TTKP33981 857 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 GEN1Q17RS7 908 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 SMYD1Q8NB12 490 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 C3orf58Q8NDZ4 430 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 ZNF420Q8TAQ5 688 aaPredicted RBP24.48■■□□□ 1.51
DDX41-202ENST00000503078 EXT2Q93063 718 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 SYT17Q9BSW7 474 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 MFSD1Q9H3U5 465 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 DSEQ9UL01 958 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 MIA3Q5JRA6 1907 aa24.48■■□□□ 1.51
DDX41-202ENST00000503078 TNPO2O14787 897 aaKnown RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 AZIN1O14977 448 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 CLOCKO15516 846 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 FCGR1AP12314 374 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 GFAPP14136 432 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 FOXM1Q08050 763 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 SPATS1Q496A3 300 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 BEND5Q7L4P6 421 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 LRRC49Q8IUZ0 686 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 PTGR2Q8N8N7 351 aaPredicted RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 OR52K2Q8NGK3 314 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 SH3RF2Q8TEC5 729 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 HDAC10Q969S8 669 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 FBXL20Q96IG2 436 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 POLR3BQ9NW08 1133 aaPredicted RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 C9JVG2 144 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 PPP6CO00743 305 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 ATE1O95260 518 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 CD1DP15813 335 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 CCR1P32246 355 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 YBX1P67809 324 aaKnown RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 MFSD10Q14728 455 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 ACBD5Q5T8D3 534 aaPredicted RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 ABRAXAS1Q6UWZ7 409 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 RTL3Q8N8U3 475 aaKnown RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 IMP4Q96G21 291 aaKnown RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 DOK1Q99704 481 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 SDR39U1Q9NRG7 319 aaPredicted RBP24.47■■□□□ 1.51
DDX41-202ENST00000503078 RGS18Q9NS28 235 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 OSER1Q9NX31 292 aa24.47■■□□□ 1.51
DDX41-202ENST00000503078 GIPC1O14908 333 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 CHRM3P20309 590 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 HMOX2P30519 316 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 FOXA1P55317 472 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 PMS2P3Q13401 168 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 COQ5Q5HYK3 327 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 PATL1Q86TB9 770 aaKnown RBP24.46■■□□□ 1.51
DDX41-202ENST00000503078 TRIM74Q86UV6 250 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 TRIM73Q86UV7 250 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 DDIASQ8IXT1 998 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 COLGALT2Q8IYK4 626 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 RPF2Q9H7B2 306 aaKnown RBP24.46■■□□□ 1.51
DDX41-202ENST00000503078 MPP6Q9NZW5 540 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 MARCH4Q9P2E8 410 aaPredicted RBP24.46■■□□□ 1.51
DDX41-202ENST00000503078 PCDHA9Q9Y5H5 950 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 FADS3Q9Y5Q0 445 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 H3BMQ9 156 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 CCL22O00626 93 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 CLIC3O95833 236 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 LBPP18428 481 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 DCKP27707 260 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 ETFBP38117 255 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 ARSDP51689 593 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 LDLRAD1Q5T700 205 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 KANK2Q63ZY3 851 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 RAB44Q7Z6P3 723 aaPredicted RBP24.46■■□□□ 1.51
DDX41-202ENST00000503078 COG8Q96MW5 612 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 RTP3Q9BQQ7 232 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 TINF2Q9BSI4 451 aa24.46■■□□□ 1.51
DDX41-202ENST00000503078 EI24O14681 340 aa24.45■■□□□ 1.51
DDX41-202ENST00000503078 MSI1O43347 362 aaKnown RBP24.45■■□□□ 1.51
DDX41-202ENST00000503078 SIX3O95343 332 aaPredicted RBP24.45■■□□□ 1.51
DDX41-202ENST00000503078 CAPGP40121 348 aa24.45■■□□□ 1.51
DDX41-202ENST00000503078 AFF1P51825 1210 aaKnown RBP24.45■■□□□ 1.51
DDX41-202ENST00000503078 RPS6KA2Q15349 733 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms