RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 PMS2CLQ68D20 193 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 NEK5Q6P3R8 708 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 ZCCHC9Q8N567 271 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 BBOF1Q8ND07 529 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 OR4K2Q8NGD2 314 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 OR13J1Q8NGT2 312 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 DTD2Q96FN9 168 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 DNAJC1Q96KC8 554 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 HSPA12BQ96MM6 686 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 RANBP9Q96S59 729 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 AGAP2Q99490 1192 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 KLF6Q99612 283 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 SLC17A9Q9BYT1 436 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 XAB2Q9HCS7 855 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 MBNL1Q9NR56 388 aaKnown RBP13.48□□□□□ -0.25
PTPN7-218ENST00000496197 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 HACD3Q9P035 362 aa13.48□□□□□ -0.25
PTPN7-218ENST00000496197 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 LRP4O75096 1905 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 E7ESA3 106 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 K7ESM1 405 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 PSMD11O00231 422 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SLC31A1O15431 190 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 PPFIA2O75334 1257 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SOD1P00441 154 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 NPY2RP49146 381 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 CCR5P51681 352 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SARNPP82979 210 aaKnown RBP13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SMAD1Q15797 465 aaKnown RBP13.47□□□□□ -0.25
PTPN7-218ENST00000496197 HIF1AQ16665 826 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 WSCD2Q2TBF2 565 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 BBS9Q3SYG4 887 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 ALS2CLQ60I27 953 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 ANKMY2Q8IV38 441 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 SNX19Q92543 992 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 MFSD3Q96ES6 412 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 ABCG8Q9H221 673 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 TRABDQ9H4I3 376 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 BFARQ9NZS9 450 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 FKBPLQ9UIM3 349 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 NFU1Q9UMS0 254 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
PTPN7-218ENST00000496197 PCDHGA2Q9Y5H1 932 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 TEX264Q9Y6I9 313 aa13.47□□□□□ -0.25
PTPN7-218ENST00000496197 ATXN2Q99700 1313 aaKnown RBP13.47□□□□□ -0.25
PTPN7-218ENST00000496197 ADAMTS9Q9P2N4 1935 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 OR51F1A6NGY5 319 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 H0Y8X5 98 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 SMAPO00193 183 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 MAP3K13O43283 966 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 LZTS3O60299 673 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 PRSS56P0CW18 603 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 ADRA1DP25100 572 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 NFKBIAP25963 317 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 IGFALSP35858 605 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 ELK3P41970 407 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 CLDN2P57739 230 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 PDIA2Q13087 525 aaKnown RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 AGERQ15109 404 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 IRF4Q15306 451 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 LPAL2Q16609 132 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 PCID2Q5JVF3 399 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 ESRP1Q6NXG1 681 aaKnown RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 CADM4Q8NFZ8 388 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 CENPTQ96BT3 561 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 NUS1Q96E22 293 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 KIFC1Q9BW19 673 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 SUDS3Q9H7L9 328 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 TREX1Q9NSU2 369 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 IL1RAPL1Q9NZN1 696 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
PTPN7-218ENST00000496197 SOX13Q9UN79 622 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 CHMP2BQ9UQN3 213 aa13.46□□□□□ -0.25
PTPN7-218ENST00000496197 A0A1W2PPC4 97 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 HEATR9A2RTY3 570 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 SDR42E2A6NKP2 422 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 C2orf81A6NN90 581 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 FADS2P1A8MWK0 482 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 CRTAMO95727 393 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 FAM153BP0C7A2 387 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 ITPKAP23677 461 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 PSMA3P25788 255 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 ARNTP27540 789 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 ARL4CP56559 192 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 VSNL1P62760 191 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 XIAPP98170 497 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 CAV1Q03135 178 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 ACVR1Q04771 509 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 CBLBQ13191 982 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 PEX6Q13608 980 aa13.45□□□□□ -0.26
PTPN7-218ENST00000496197 HLTFQ14527 1009 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms