RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 BAG4O95429 457 aaKnown RBP4.03□□□□□ -1.76
SMC4-223ENST00000493695 CHRM4P08173 479 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 AZU1P20160 251 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 CHRNB4P30926 498 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 RYKP34925 604 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 EIF2S3P41091 472 aaKnown RBP4.03□□□□□ -1.76
SMC4-223ENST00000493695 CLCNKAP51800 687 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 NR1H2P55055 460 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 TBL3Q12788 808 aaKnown RBP4.03□□□□□ -1.76
SMC4-223ENST00000493695 CBWD5Q5RIA9 395 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 SFMBT2Q5VUG0 894 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 TMTC1Q8IUR5 882 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 RNF113BQ8IZP6 322 aaKnown RBP4.03□□□□□ -1.76
SMC4-223ENST00000493695 CPXM2Q8N436 756 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 CNOT9Q92600 299 aaKnown RBP4.03□□□□□ -1.76
SMC4-223ENST00000493695 COG8Q96MW5 612 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 SIN3AQ96ST3 1273 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 REEP2Q9BRK0 252 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 POLR3GLQ9BT43 218 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 NOD2Q9HC29 1040 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 SMYD2Q9NRG4 433 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 CTNNAL1Q9UBT7 734 aa4.03□□□□□ -1.76
SMC4-223ENST00000493695 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC4-223ENST00000493695 CACNA1FO60840 1977 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 BLOC1S5-TXNDC5H3BN57 136 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 HOXC11O43248 304 aaPredicted RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 CHATP28329 748 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 HOXC13P31276 330 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 VAMP2P63027 116 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 PDE1BQ01064 536 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 UBE3AQ05086 875 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 GRIK2Q13002 908 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 ALFQ53S48 1182 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 SIRPB2Q5JXA9 342 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 ARHGAP17Q68EM7 881 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 DENND1BQ6P3S1 775 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 WDR63Q8IWG1 891 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 AGBL3Q8NEM8 1001 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 CEP70Q8NHQ1 597 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 MAGEC3Q8TD91 643 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 ABTB1Q969K4 478 aaPredicted RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 STAMBPL1Q96FJ0 436 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 FKRPQ9H9S5 495 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 MCM9Q9NXL9 1143 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 C9orf78Q9NZ63 289 aaPredicted RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 ZNF69Q9UC07 566 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 TINAGQ9UJW2 476 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 RRP7AQ9Y3A4 280 aaKnown RBP4.02□□□□□ -1.77
SMC4-223ENST00000493695 NFE2L3Q9Y4A8 694 aa4.02□□□□□ -1.77
SMC4-223ENST00000493695 SMCHD1A6NHR9 2005 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 RRN3P2A6NIE6 340 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 HHLA1C9JL84 531 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 TSPAN3O60637 253 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 PYGLP06737 847 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 INHBAP08476 426 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 PATE4P0C8F1 98 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 PTPN2P17706 415 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 RXRAP19793 462 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 MAPK9P45984 424 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 IRX6P78412 446 aaPredicted RBP4.01□□□□□ -1.77
SMC4-223ENST00000493695 ANKRD1Q15327 319 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 INTS11Q5TA45 600 aaKnown RBP4.01□□□□□ -1.77
SMC4-223ENST00000493695 LRRC8EQ6NSJ5 796 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 SLC27A1Q6PCB7 646 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 ZNF34Q8IZ26 560 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 MAELQ96JY0 434 aaKnown RBP4.01□□□□□ -1.77
SMC4-223ENST00000493695 MXRA8Q9BRK3 442 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 PCDH9Q9HC56 1237 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 WASH6PQ9NQA3 447 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 INTS10Q9NVR2 710 aaKnown RBP4.01□□□□□ -1.77
SMC4-223ENST00000493695 BABAM1Q9NWV8 329 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
SMC4-223ENST00000493695 A0A0U1RQF3 1178 aa4□□□□□ -1.77
SMC4-223ENST00000493695 FAM90A7PA6NKC0 464 aa4□□□□□ -1.77
SMC4-223ENST00000493695 SH2D7A6NKC9 451 aaPredicted RBP4□□□□□ -1.77
SMC4-223ENST00000493695 FAM90A22PA8MWA6 464 aa4□□□□□ -1.77
SMC4-223ENST00000493695 FAM90A12PA8MX19 464 aa4□□□□□ -1.77
SMC4-223ENST00000493695 FAM90A23PA8MXZ1 464 aa4□□□□□ -1.77
SMC4-223ENST00000493695 BCAT2O15382 392 aaPredicted RBP4□□□□□ -1.77
SMC4-223ENST00000493695 WDR1O75083 606 aa4□□□□□ -1.77
SMC4-223ENST00000493695 MYOD1P15172 320 aa4□□□□□ -1.77
SMC4-223ENST00000493695 NR1D1P20393 614 aa4□□□□□ -1.77
SMC4-223ENST00000493695 S1PR1P21453 382 aa4□□□□□ -1.77
SMC4-223ENST00000493695 ISL1P61371 349 aa4□□□□□ -1.77
SMC4-223ENST00000493695 KHDRBS1Q07666 443 aaKnown RBP eCLIP4□□□□□ -1.77
SMC4-223ENST00000493695 VEPH1Q14D04 833 aa4□□□□□ -1.77
SMC4-223ENST00000493695 TAF12Q16514 161 aa4□□□□□ -1.77
SMC4-223ENST00000493695 LPAL2Q16609 132 aa4□□□□□ -1.77
SMC4-223ENST00000493695 WDR45BQ5MNZ6 344 aa4□□□□□ -1.77
SMC4-223ENST00000493695 TRNP1Q6NT89 227 aa4□□□□□ -1.77
SMC4-223ENST00000493695 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
SMC4-223ENST00000493695 C15orf39Q6ZRI6 1047 aa4□□□□□ -1.77
SMC4-223ENST00000493695 TAOK1Q7L7X3 1001 aa4□□□□□ -1.77
SMC4-223ENST00000493695 MAPK1IP1LQ8NDC0 245 aa4□□□□□ -1.77
SMC4-223ENST00000493695 TM9SF4Q92544 642 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms