RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PCDHGB3Q9Y5G1 929 aa16.31■□□□□ 0.2
BRAT1-206ENST00000493232 GLYATL1P3A0A0U1RQE8 302 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TGDSO95455 350 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 NFATC1O95644 943 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 B3GNT6Q6ZMB0 384 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TRABD2AQ86V40 505 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 OR10G6Q8NH81 332 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 RCN3Q96D15 328 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 BTBD3Q9Y2F9 522 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TRAF6Q9Y4K3 522 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 FGBP02675 491 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TRIM32Q13049 653 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 ARSHQ5FYA8 562 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 AAGABQ6PD74 315 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 SCIMPQ6UWF3 145 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 CERS6Q6ZMG9 384 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 XYLT1Q86Y38 959 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 HOPXQ9BPY8 73 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 KIFC1Q9BW19 673 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 NIFKQ9BYG3 293 aaKnown RBP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 SUCOQ9UBS9 1254 aaKnown RBP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 IRGMA1A4Y4 181 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 RCCD1A6NED2 376 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 ATG13O75143 517 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 PKMP14618 531 aaKnown RBP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TSPAN8P19075 237 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 EPHA3P29320 983 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 RHAGQ02094 409 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 SLC25A24Q6NUK1 477 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 CUZD1Q86UP6 607 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 ZNF540Q8NDQ6 660 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 HECAQ9UBI9 543 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-206ENST00000493232 RPTNQ6XPR3 784 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 OSBPL11Q9BXB4 747 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 TRPS1Q9UHF7 1281 aa16.3■□□□□ 0.2
BRAT1-206ENST00000493232 SLC28A2O43868 658 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 SSR2P43308 183 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CRELD2Q6UXH1 353 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 DEFB118Q96PH6 123 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CLIC5Q9NZA1 410 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 GPN3Q9UHW5 284 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 POLR3HQ9Y535 204 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3DA0A087WVF3 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3IA0A087WXS9 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3EA0A087X179 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3KA0A087X1G2 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3FA6NER0 549 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3LB9A6J9 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 ZMPSTE24O75844 475 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 NDST3O95803 873 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3HP0C7X1 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 UBAP2LQ14157 1087 aaKnown RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CRY2Q49AN0 593 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3GQ6DHY5 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3CQ6IPX1 549 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 TBC1D3Q8IZP1 549 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 DNAJC11Q9NVH1 559 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 PPIEQ9UNP9 301 aaKnown RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 IFNGP01579 166 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 BPGMP07738 259 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 MYL9P24844 172 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 UGT1A5P35504 534 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 BUD31P41223 144 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 NR1H2P55055 460 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 PLPP4Q5VZY2 271 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 MOB2Q70IA6 237 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CXXC5Q7LFL8 322 aaKnown RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 GPR152Q8TDT2 470 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 GMIPQ9P107 970 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 NT5C1B-RDH14C9J2C7 533 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CDH5P33151 784 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 CPTPQ5TA50 214 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 NOL6Q9H6R4 1146 aaKnown RBP16.29■□□□□ 0.2
BRAT1-206ENST00000493232 PNPLA3Q9NST1 481 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 RWDD3Q9Y3V2 267 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 PCDHA2Q9Y5H9 948 aa16.29■□□□□ 0.2
BRAT1-206ENST00000493232 DHX15O43143 795 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 SPAM1P38567 509 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 ST6GALNAC4Q9H4F1 302 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 IMP3Q9NV31 184 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 SAMD4AQ9UPU9 718 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 WTIPA6NIX2 430 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 ANPEPP15144 967 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 DRD4P21917 467 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 MANFP55145 182 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 CACNG1Q06432 222 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 DCTN2Q13561 401 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 ZIK1Q3SY52 487 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 RNASEH2BQ5TBB1 312 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 HIPK1Q86Z02 1210 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
BRAT1-206ENST00000493232 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
BRAT1-206ENST00000493232 TLE6Q9H808 572 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms