RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DNAJC18Q9H819 358 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ECT2Q9H8V3 914 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 GBA2Q9HCG7 927 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PCDH12Q9NPG4 1184 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PDGFCQ9NRA1 345 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 AGPAT3Q9NRZ7 376 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 TXLNGQ9NUQ3 528 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SPATS2LQ9NUQ6 558 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PARVAQ9NVD7 372 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 RAB20Q9NX57 234 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 TUBA8Q9NY65 449 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SMARCAL1Q9NZC9 954 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 GRHL1Q9NZI5 618 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 RGL1Q9NZL6 768 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 GCNT4Q9P109 453 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 KLHL13Q9P2N7 655 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 DNAJB4Q9UDY4 337 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 POLLQ9UGP5 575 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LGALS13Q9UHV8 139 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 HERC5Q9UII4 1024 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 LNPEPQ9UIQ6 1025 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ZNF180Q9UJW8 692 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FEM1BQ9UK73 627 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 GTF3C4Q9UKN8 822 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 NDRG4Q9ULP0 352 aaKnown RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ZMYND8Q9ULU4 1186 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SLC12A4Q9UP95 1085 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 CNTN6Q9UQ52 1028 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 C15orf41Q9Y2V0 281 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FOCADQ5VW36 1801 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SPATA31A5Q5VU36 1347 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 FRMPD2Q68DX3 1309 aaPredicted RBP2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 EMSYQ7Z589 1322 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 SPATA31A7Q8IWB4 1347 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PHLPP1O60346 1717 aa2.11□□□□□ -2.07
SNRNP40-207ENST00000491106 PLIN4Q96Q06 1357 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 STRCP1A6NGW2 1772 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 COL14A1Q05707 1796 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 STRCQ7RTU9 1775 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CASZ1Q86V15 1759 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MICAL3Q7RTP6 2002 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 XIRP1Q702N8 1843 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GSTTP1A0A1W2PQM5 241 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 A0A1W2PRG0 241 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TMEM120BA0PK00 339 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 WDR27A2RRH5 827 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 LRRD1A4D1F6 860 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ARHGEF35A5YM69 484 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGEA13PA6NCF6 341 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ENO4A6NNW6 628 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 A8MXQ7 604 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 RASA4BC9J798 803 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PROB1E7EW31 1015 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 F8W8V4 182 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 H3BNX3 289 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 INO80B-WBP1J3KQ70 363 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 K7ERI5 159 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 BTN3A1O00481 513 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TM9SF1O15321 606 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 RASA4O43374 803 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ECE2O60344 883 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MAGEC1O60732 1142 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DIAPH2O60879 1101 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP2C2O75185 946 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NEBLO76041 1014 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TOMM70O94826 608 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 UFL1O94874 794 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KLHL2O95198 593 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 VNN1O95497 513 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 OAS1P00973 400 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 IL1BP01584 269 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ALDH2P05091 517 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ABHD2P08910 425 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GSTA2P09210 222 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 WEE2P0C1S8 567 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NHLRC4P0CG21 123 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 T-ENOLP0DO92 83 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ARP10275 920 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 NPR1P16066 1061 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CREB1P16220 341 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PECAM1P16284 738 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ATP6V1C1P21283 382 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ABCB4P21439 1286 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 AKAP5P24588 427 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 KLRK1P26718 216 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 MARK3P27448 753 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PHBP35232 272 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PCK1P35558 622 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GCLMP48507 274 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 DNA2P51530 1060 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 CASP5P51878 434 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SH3BGRP55822 239 aaPredicted RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 PSMC5P62195 406 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 IRX4P78413 519 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 SARNPP82979 210 aaKnown RBP2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 E2F1Q01094 437 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 GCNT1Q02742 428 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 TFF2Q03403 129 aa2.1□□□□□ -2.07
SNRNP40-207ENST00000491106 ICA1Q05084 483 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms