RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 GRAMD2BQ96HH9 432 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 PCYT2Q99447 389 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 SLC26A6Q9BXS9 759 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 PRKRIP1Q9H875 184 aaPredicted RBP5.17□□□□□ -1.58
CCDC39-206ENST00000489868 KCNG2Q9UJ96 466 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 ERVK-11Q9UQG0 969 aa5.17□□□□□ -1.58
CCDC39-206ENST00000489868 A0A087WYN8 130 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 FAM237AA0A1B0GTK4 181 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 DENND3A2RUS2 1198 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 HNRNPCL2B2RXH8 293 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 J3KRW8 73 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 CLGNO14967 610 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 RTN3O95197 1032 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 HLA-DOBP13765 273 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 NLRP5P59047 1200 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 ECT2LQ008S8 904 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 SLC20A2Q08357 652 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 TNFAIP1Q13829 316 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 ZNF718Q3SXZ3 478 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 C6orf141Q5SZD1 244 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 GGNBP1Q5YKI7 109 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 METTL2BQ6P1Q9 378 aaKnown RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 TSSK4Q6SA08 328 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 INTS12Q96CB8 462 aaKnown RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 MMABQ96EY8 250 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 TMEM19Q96HH6 336 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 METTL2AQ96IZ6 378 aaKnown RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 STRA6Q9BX79 667 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 RANBP17Q9H2T7 1088 aaKnown RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 EBF2Q9HAK2 575 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 SEBOXQ9HB31 216 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 PDS5AQ29RF7 1337 aaKnown RBP5.16□□□□□ -1.58
CCDC39-206ENST00000489868 SCN5AQ14524 2016 aa5.16□□□□□ -1.58
CCDC39-206ENST00000489868 A0A0G2JPF8 293 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 HNRNPCL3B7ZW38 293 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 HNRNPCL1O60812 293 aaKnown RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 SEC14L2O76054 403 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 CD4P01730 458 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 HNRNPCL4P0DMR1 293 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 BDKRB2P30411 391 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 ELF1P32519 619 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 RARSP54136 660 aaKnown RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 RAD23BP54727 409 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 DLX5P56178 289 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 OLR1P78380 273 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 CCNI2Q6ZMN8 369 aaPredicted RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 DIS3L2Q8IYB7 885 aaKnown RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 RFLNBQ8N5W9 214 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 HMGCLL1Q8TB92 370 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 SLC20A1Q8WUM9 679 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 FIG4Q92562 907 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 IGSF8Q969P0 613 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 WDFY2Q96P53 400 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 TMEM47Q9BQJ4 181 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 IFIH1Q9BYX4 1025 aaKnown RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 POLR1BQ9H9Y6 1135 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 PCDH9Q9HC56 1237 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 DONSONQ9NYP3 566 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 CNOT8Q9UFF9 292 aaKnown RBP5.15□□□□□ -1.59
CCDC39-206ENST00000489868 PADI3Q9ULW8 664 aa5.15□□□□□ -1.59
CCDC39-206ENST00000489868 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TTC36A6NLP5 189 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 B4E171 279 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 BUB3O43684 328 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 NKX2-2O95096 273 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CLEC3BP05452 202 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 DDX5P17844 614 aaKnown RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 S1PR1P21453 382 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TSPAN7P41732 249 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CLCNKAP51800 687 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 F2RL1P55085 397 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 RPL7AP62424 266 aaKnown RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 RELQ04864 619 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TBX2Q13207 712 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 OLIG2Q13516 323 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 FRG1Q14331 258 aaKnown RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 ZNF672Q499Z4 452 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CDONQ4KMG0 1287 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 WBP2NLQ6ICG8 309 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 RGMBQ6NW40 437 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 DUS1LQ6P1R4 473 aaKnown RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 KCTD18Q6PI47 426 aaPredicted RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CYP20A1Q6UW02 462 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 GFRALQ6UXV0 394 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TUBA1AQ71U36 451 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 DPPA4Q7L190 304 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TMEM219Q86XT9 240 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CERS3Q8IU89 383 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 BEST3Q8N1M1 668 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 PCDH20Q8N6Y1 951 aaKnown RBP5.14□□□□□ -1.59
CCDC39-206ENST00000489868 KBTBD3Q8NAB2 608 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TMEM116Q8NCL8 245 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 ACOX2Q99424 681 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 CMKLR1Q99788 373 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 SH3GL2Q99962 352 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 TUBA1CQ9BQE3 449 aa5.14□□□□□ -1.59
CCDC39-206ENST00000489868 MCM9Q9NXL9 1143 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 181.1 ms