RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 TACC1O75410 805 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 TFP02787 698 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 CTAGE8P0CG41 777 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 RRM1P23921 792 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 RHBDL3P58872 404 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 SREBF2Q12772 1141 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 RNPS1Q15287 305 aaKnown RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 SLC45A4Q5BKX6 768 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ATG16L1Q676U5 607 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 HIST2H2BDQ6DRA6 164 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 KCTD18Q6PI47 426 aaPredicted RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 CPLX2Q6PUV4 134 aaKnown RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ZNF852Q6ZMS4 543 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ASB18Q6ZVZ8 466 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 CTAGE4Q8IX94 777 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 SPATA6LQ8N4H0 392 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 ZBTB2Q8N680 514 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 TAS1R2Q8TE23 839 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 BBS4Q96RK4 519 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 PCYT2Q99447 389 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 HEMGNQ9BXL5 484 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 GLIS2Q9BZE0 524 aaPredicted RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 TTYH1Q9H313 450 aaPredicted RBP2.97□□□□□ -1.93
CPSF3-205ENST00000489629 PLEKHA4Q9H4M7 779 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 C20orf141Q9NUB4 165 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 HCN3Q9P1Z3 774 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 DLGAP4Q9Y2H0 992 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 FAM96BQ9Y3D0 163 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 OR2W1Q9Y3N9 320 aa2.97□□□□□ -1.93
CPSF3-205ENST00000489629 A0A1B0GVY2 172 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ANTXRLA6NF34 631 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 GAGE10A6NGK3 116 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 PRSS1P07477 247 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 NR1D1P20393 614 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 POU1F1P28069 291 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 CCR5P51681 352 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 CDH15P55291 814 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 HIST2H2ACQ16777 129 aaPredicted RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 GPATCH4Q5T3I0 446 aaKnown RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 METTL2BQ6P1Q9 378 aaKnown RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ARHGAP11AQ6P4F7 1023 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 LCTLQ6UWM7 567 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 CPOQ8IVL8 374 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 SPATA5Q8NB90 893 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF485Q8NCK3 441 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 HUS1BQ8NHY5 278 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 HERVK_113Q902F9 699 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 CCT6BQ92526 530 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF524Q96C55 264 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 LGALS12Q96DT0 336 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 METTL2AQ96IZ6 378 aaKnown RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 C17orf77Q96MU5 243 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ZNF583Q96ND8 569 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 CMKLR1Q99788 373 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 SYT17Q9BSW7 474 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 TKTL2Q9H0I9 626 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 PPP1R3EQ9H7J1 279 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 FKRPQ9H9S5 495 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 BPIFA1Q9NP55 256 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 HINT3Q9NQE9 182 aaKnown RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 BEX4Q9NWD9 120 aaPredicted RBP2.96□□□□□ -1.94
CPSF3-205ENST00000489629 HSF4Q9ULV5 492 aa2.96□□□□□ -1.94
CPSF3-205ENST00000489629 ERI2A8K979 691 aaKnown RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 NBNO60934 754 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 WDR1O75083 606 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 FTCDO95954 541 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 ALDH4A1P30038 563 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 BDKRB2P30411 391 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 DCTP40126 519 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 ISL1P61371 349 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 PDE1BQ01064 536 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 PMP22Q01453 160 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 PPIGQ13427 754 aaKnown RBP eCLIP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 TDGQ13569 410 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 GTF2H2Q13888 395 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 CCNYL2Q5T2Q4 361 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 GTF2H2CQ6P1K8 395 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 KCTD8Q6ZWB6 473 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 NOL8Q76FK4 1167 aaKnown RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 LRRC8DQ7L1W4 858 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 MYPOPQ86VE0 399 aaPredicted RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 TDRPQ86YL5 185 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 SLC41A2Q96JW4 573 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 MTERF1Q99551 399 aaKnown RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 FAM110AQ9BQ89 295 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 ISCA1Q9BUE6 129 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 BARHL1Q9BZE3 327 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 INTS2Q9H0H0 1204 aaKnown RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 NDST4Q9H3R1 872 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 GPR108Q9NPR9 543 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 TMEM160Q9NX00 188 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 SLC25A10Q9UBX3 287 aaPredicted RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 TTC7AQ9ULT0 858 aaPredicted RBP2.95□□□□□ -1.94
CPSF3-205ENST00000489629 GPR52Q9Y2T5 361 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 LOXL2Q9Y4K0 774 aa2.95□□□□□ -1.94
CPSF3-205ENST00000489629 GUCY1B2O75343 617 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms