RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 RHBDF1Q96CC6 855 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 TTC14Q96N46 770 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 C1QTNF5Q9BXJ0 243 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 NDST4Q9H3R1 872 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 VEZTQ9HBM0 779 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 SLC6A13Q9NSD5 602 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 MDFICQ9P1T7 246 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 SLC13A4Q9UKG4 626 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 INTS6Q9UL03 887 aaKnown RBP3.64□□□□□ -1.83
RFC4-213ENST00000489028 MKLN1Q9UL63 735 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 VDAC3Q9Y277 283 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 CEPT1Q9Y6K0 416 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 WDR81Q562E7 1941 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 AGR2O95994 175 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 HOXB5P09067 269 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 ITGA2P17301 1181 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 AMD1P17707 334 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 XBP1P17861 261 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 S1PR1P21453 382 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 ICAM3P32942 547 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 CPOXP36551 454 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 CLCNKAP51800 687 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 NEXNQ0ZGT2 675 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 RGMBQ6NW40 437 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 PQLC2Q6ZP29 291 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 FOXL2NBQ6ZUU3 175 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 SFR1Q86XK3 245 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 EXOC8Q8IYI6 725 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 C1orf87Q8N0U7 546 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 CNTROBQ8N137 903 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 PPM1EQ8WY54 764 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 ABTB1Q969K4 478 aaPredicted RBP3.63□□□□□ -1.83
RFC4-213ENST00000489028 CMKLR1Q99788 373 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 MYH16Q9H6N6 1097 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 PCDH9Q9HC56 1237 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 TCF7L2Q9NQB0 619 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 KLHL1Q9NR64 748 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 MCM9Q9NXL9 1143 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 ABI3Q9P2A4 366 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 ADAM18Q9Y3Q7 739 aa3.63□□□□□ -1.83
RFC4-213ENST00000489028 A0A0B4J293 547 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 A0A1B0GVC2 190 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 VCYO14598 125 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 LMX1BO60663 402 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 TIPRLO75663 272 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 ATP1A3P13637 1013 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 BDKRB2P30411 391 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 CORO1AP31146 461 aaKnown RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 PIP4K2AP48426 406 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 CTCFP49711 727 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 GORABQ5T7V8 394 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 ACAD10Q6JQN1 1059 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 METTL2BQ6P1Q9 378 aaKnown RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 FAM122CQ6P4D5 195 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 KCTD18Q6PI47 426 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 INO80CQ6PI98 192 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 DSG4Q86SJ6 1040 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 SLC9B2Q86UD5 537 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 EXOC3L1Q86VI1 746 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 CCDC13Q8IYE1 715 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 HMGCLL1Q8TB92 370 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 PSPC1Q8WXF1 523 aaKnown RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 GRAMD2BQ96HH9 432 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 METTL2AQ96IZ6 378 aaKnown RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 PIP5K1AQ99755 562 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 KIF9Q9HAQ2 790 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 SCPEP1Q9HB40 452 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 UBN1Q9NPG3 1134 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 TMEM30AQ9NV96 361 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 C9orf78Q9NZ63 289 aaPredicted RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 RALYQ9UKM9 306 aaKnown RBP3.62□□□□□ -1.83
RFC4-213ENST00000489028 PADI3Q9ULW8 664 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 ERVK-11Q9UQG0 969 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 UTYO14607 1347 aa3.62□□□□□ -1.83
RFC4-213ENST00000489028 TAF1P21675 1872 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 NPIPB15A6NHN6 443 aaPredicted RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 LRRC53A6NM62 1247 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 CDH1P12830 882 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 MYOD1P15172 320 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 IL7RP16871 459 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 DDX5P17844 614 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 MCM3P25205 808 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 RGS2P41220 211 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 TMPOP42166 694 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 CLCN3P51790 818 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 RAD23BP54727 409 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 ACSM2AQ08AH3 577 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 TROAPQ12815 778 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 RBBP5Q15291 538 aaKnown RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 GSTA3Q16772 222 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 KRT24Q2M2I5 525 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 USP41Q3LFD5 358 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 CXorf66Q5JRM2 361 aaPredicted RBP3.61□□□□□ -1.83
RFC4-213ENST00000489028 KCNT1Q5JUK3 1230 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 STXBP5Q5T5C0 1151 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 STPG1Q5TH74 334 aa3.61□□□□□ -1.83
RFC4-213ENST00000489028 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms