RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CTAGE9A4FU28 777 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 MMP2P08253 660 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 CTAGE8P0CG41 777 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 SLC2A4P14672 509 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 DDX5P17844 614 aaKnown RBP2.5□□□□□ -2.01
CCDC93-209ENST00000488908 SERPINF1P36955 418 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 RIGQ13278 110 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 SULT6B1Q6IMI4 303 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 ANKRD54Q6NXT1 300 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 CTAGE4Q8IX94 777 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 FCAMRQ8WWV6 532 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 SH3KBP1Q96B97 665 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 TNIP3Q96KP6 325 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 MTERF1Q99551 399 aaKnown RBP2.5□□□□□ -2.01
CCDC93-209ENST00000488908 CMKLR1Q99788 373 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 TAF1DQ9H5J8 278 aaPredicted RBP2.5□□□□□ -2.01
CCDC93-209ENST00000488908 BABAM1Q9NWV8 329 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 LOXL2Q9Y4K0 774 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 STON1Q9Y6Q2 735 aa2.5□□□□□ -2.01
CCDC93-209ENST00000488908 HMX3A6NHT5 357 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 ZNHIT1O43257 154 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 CEP104O60308 925 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 ETFAP13804 333 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 DDIT3P35638 169 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 RPL24P83731 157 aaKnown RBP2.49□□□□□ -2.01
CCDC93-209ENST00000488908 TUBB2AQ13885 445 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 TECRLQ5HYJ1 363 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 CBWD5Q5RIA9 395 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 ZNF774Q6NX45 483 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 TTI2Q6NXR4 508 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 PGBD2Q6P3X8 592 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 MOB3CQ70IA8 216 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 KIAA2013Q8IYS2 634 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 BMPERQ8N8U9 685 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 ATG16L2Q8NAA4 619 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 OR2AK2Q8NG84 335 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 PIGTQ969N2 578 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 FBXL8Q96CD0 374 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 KLHL29Q96CT2 875 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 LINGO1Q96FE5 620 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 TWNKQ96RR1 684 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 IWS1Q96ST2 819 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 TUBB2BQ9BVA1 445 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 BICC1Q9H694 974 aaKnown RBP2.49□□□□□ -2.01
CCDC93-209ENST00000488908 ESRP2Q9H6T0 727 aaKnown RBP2.49□□□□□ -2.01
CCDC93-209ENST00000488908 MKKSQ9NPJ1 570 aaPredicted RBP2.49□□□□□ -2.01
CCDC93-209ENST00000488908 POLG2Q9UHN1 485 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 CARD8Q9Y2G2 431 aa2.49□□□□□ -2.01
CCDC93-209ENST00000488908 SMCHD1A6NHR9 2005 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 CLIC2O15247 247 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 NBPF7P0C2Y1 421 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 POLR2CP19387 275 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 GATA2P23769 480 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 BDKRB2P30411 391 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 MAP2K2P36507 400 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 CLDN2P57739 230 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 GALNT1Q10472 559 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 EIF2S3LQ2VIR3 472 aaKnown RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ZC2HC1CQ53FD0 456 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 TMEM35AQ53FP2 167 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 OR7E24Q6IFN5 339 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 DENND1BQ6P3S1 775 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ERC1Q8IUD2 1116 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 FMNL3Q8IVF7 1028 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 FBXL16Q8N461 479 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 PPHLN1Q8NEY8 458 aaKnown RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 BEST2Q8NFU1 509 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 OR52I2Q8NH67 350 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 RAB40AQ8WXH6 277 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 CNOT9Q92600 299 aaKnown RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ARHGEF26Q96DR7 871 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ZNF300Q96RE9 604 aaPredicted RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 SH3GL2Q99962 352 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 SYT11Q9BT88 431 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 DDX4Q9NQI0 724 aaKnown RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ADPRHL2Q9NX46 363 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 SUFUQ9UMX1 484 aa2.48□□□□□ -2.01
CCDC93-209ENST00000488908 PRRC2AP48634 2157 aaKnown RBP2.48□□□□□ -2.01
CCDC93-209ENST00000488908 ACKR2O00590 384 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 FAM106CPP0CH98 169 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 ACADSP16219 412 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 MAOAP21397 527 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 PDIA3P30101 505 aaKnown RBP2.47□□□□□ -2.01
CCDC93-209ENST00000488908 AMPHP49418 695 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 AARSP49588 968 aaKnown RBP eCLIP2.47□□□□□ -2.01
CCDC93-209ENST00000488908 TCTEX1D4Q5JR98 221 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 ZNF613Q6PF04 617 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 SRLQ86TD4 932 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 NOXA1Q86UR1 476 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 CDC20BQ86Y33 519 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 FAM177A1Q8N128 213 aaPredicted RBP2.47□□□□□ -2.01
CCDC93-209ENST00000488908 THAP4Q8WY91 577 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 QRFPRQ96P65 431 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 SIN3AQ96ST3 1273 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 MPHOSPH8Q99549 860 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 PLEKHA4Q9H4M7 779 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 SLC32A1Q9H598 525 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 CHPF2Q9P2E5 772 aa2.47□□□□□ -2.01
CCDC93-209ENST00000488908 A0A087WV62 115 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms