RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MEA1Q16626 185 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 EIF2S3LQ2VIR3 472 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 MTSS1LQ765P7 747 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 FASTKD5Q7L8L6 764 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 LINGO2Q7L985 606 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 WDR63Q8IWG1 891 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 FBXL14Q8N1E6 418 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 IQCF1Q8N6M8 205 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 SCCPDHQ8NBX0 429 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 AGBL3Q8NEM8 1001 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 NEK9Q8TD19 979 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 SCFD2Q8WU76 684 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 RND1Q92730 232 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 IGSF8Q969P0 613 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 OTULINQ96BN8 352 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 SLC41A2Q96JW4 573 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 C1orf74Q96LT6 269 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 TMEM68Q96MH6 324 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 TREX2Q9BQ50 279 aaPredicted RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 FAM110AQ9BQ89 295 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 KAT14Q9H8E8 782 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 SLC28A3Q9HAS3 691 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 ADD3Q9UEY8 706 aaKnown RBP3.3□□□□□ -1.88
CD46-215ENST00000488596 FZD10Q9ULW2 581 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 PCDHA7Q9UN72 937 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 STON1Q9Y6Q2 735 aa3.3□□□□□ -1.88
CD46-215ENST00000488596 TRIP12Q14669 1992 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 A0A1W2PRG0 241 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 AKR1B15C9JRZ8 316 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 VCYO14598 125 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 VILLO15195 856 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 GJB3O75712 270 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 SLC25A12O75746 678 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 OR2C1O95371 312 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 FTCDO95954 541 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 CLTBP09497 229 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 MCM3P25205 808 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 ITGB8P26012 769 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 TM4SF1P30408 202 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 HOXD3P31249 432 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 UBA7P41226 1012 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 GARSP41250 739 aaKnown RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 PCYT1AP49585 367 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 MXI1P50539 228 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 NAP1L1P55209 391 aaKnown RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 CREB5Q02930 508 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 NFATC4Q14934 902 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 SHBQ15464 509 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 USP41Q3LFD5 358 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 ZSCAN23Q3MJ62 389 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 CDONQ4KMG0 1287 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 KIAA0930Q6ICG6 404 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 CHST9Q7L1S5 443 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 PCGF5Q86SE9 256 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 ZC3HC1Q86WB0 502 aaKnown RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 SPATA2LQ8IUW3 424 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 SPATA6LQ8N4H0 392 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 AADATQ8N5Z0 425 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 TXNDC15Q96J42 360 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 TMEM47Q9BQJ4 181 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 DCLK3Q9C098 648 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 SMARCAD1Q9H4L7 1026 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 PDZD7Q9H5P4 517 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 HINT3Q9NQE9 182 aaKnown RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 HIF1ANQ9NWT6 349 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 TERF2IPQ9NYB0 399 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 SLC9A2Q9UBY0 812 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 FBXO2Q9UK22 296 aaPredicted RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 CDC14AQ9UNH5 594 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 ERVK-11Q9UQG0 969 aa3.29□□□□□ -1.88
CD46-215ENST00000488596 R3HDM2Q9Y2K5 976 aaKnown RBP3.29□□□□□ -1.88
CD46-215ENST00000488596 IGHV4-28A0A0C4DH34 117 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 hDV102S1A0JD36 115 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 HMGB1P1B2RPK0 211 aaPredicted RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 H3BQ06 376 aaPredicted RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 ACOT8O14734 319 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 FGF3P11487 239 aaPredicted RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 ALOX12P18054 663 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 CHATP28329 748 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 ACTN2P35609 894 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 AMTP48728 403 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 METAP2P50579 478 aaKnown RBP eCLIP3.28□□□□□ -1.88
CD46-215ENST00000488596 CLNS1AP54105 237 aaKnown RBP3.28□□□□□ -1.88
CD46-215ENST00000488596 CDH8P55286 799 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 MC1RQ01726 317 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 LTBQ06643 244 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 Q0VFX4 171 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 TRAF3Q13114 568 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 KEAP1Q14145 624 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 IRF3Q14653 427 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 CRYMQ14894 314 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 NAB2Q15742 525 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 EFNB3Q15768 340 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 PAPPA-AS1Q5QFB9 102 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 C9orf50Q5SZB4 431 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 C6orf141Q5SZD1 244 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 LRIF1Q5T3J3 769 aa3.28□□□□□ -1.88
CD46-215ENST00000488596 SPATA1Q5VX52 437 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms