RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 EEF1A1P68104 462 aaKnown RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 PPIGQ13427 754 aaKnown RBP eCLIP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 SLC45A4Q5BKX6 768 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 FBXO47Q5MNV8 452 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 STXBP5Q5T5C0 1151 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 MAP3K21Q5TCX8 1036 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 EEF1A1P5Q5VTE0 462 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 METTL2BQ6P1Q9 378 aaKnown RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF852Q6ZMS4 543 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 MYPOPQ86VE0 399 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 ZNF34Q8IZ26 560 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 ZBTB2Q8N680 514 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 PLD5Q8N7P1 536 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 OR2AK2Q8NG84 335 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 ELP4Q96EB1 424 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 METTL2AQ96IZ6 378 aaKnown RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 MOV10L1Q9BXT6 1211 aaKnown RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 BEX4Q9NWD9 120 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 TTC7AQ9ULT0 858 aaPredicted RBP3.84□□□□□ -1.79
CCDC66-221ENST00000487739 LOXL2Q9Y4K0 774 aa3.84□□□□□ -1.79
CCDC66-221ENST00000487739 TEX22C9J3V5 150 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 GUCY1B2O75343 617 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 MYOD1P15172 320 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 PAX1P15863 534 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 ALDH4A1P30038 563 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 BDKRB2P30411 391 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 CORO1AP31146 461 aaKnown RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 DDIT3P35638 169 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 PDE1BQ01064 536 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 PPP2R5BQ15173 497 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF876PQ49A33 203 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF772Q68DY9 489 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 TMEM81Q6P7N7 255 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 FBXO46Q6PJ61 603 aaPredicted RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 LCTLQ6UWM7 567 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 DHX40Q8IX18 779 aaKnown RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 KLHDC9Q8NEP7 349 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 DBF4BQ8NFT6 615 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 OR10V1Q8NGI7 309 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 MTERF1Q99551 399 aaKnown RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 SYT17Q9BSW7 474 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 KCNN2Q9H2S1 579 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 PPP1R3EQ9H7J1 279 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 GPR108Q9NPR9 543 aa3.83□□□□□ -1.8
CCDC66-221ENST00000487739 LSM4Q9Y4Z0 139 aaKnown RBP3.83□□□□□ -1.8
CCDC66-221ENST00000487739 TACC1O75410 805 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 TFP02787 698 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 TUBBP07437 444 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 INHBAP08476 426 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 IRF1P10914 325 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 KRT5P13647 590 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 SHMT1P34896 483 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 TRAPPC10P48553 1259 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 TUBB4BP68371 445 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 FOXD4Q12950 439 aaPredicted RBP3.82□□□□□ -1.8
CCDC66-221ENST00000487739 GAGE5Q13069 117 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 GAGE6Q13070 117 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 SIRPB2Q5JXA9 342 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 GGNBP1Q5YKI7 109 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 ATG16L1Q676U5 607 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 ARHGAP17Q68EM7 881 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 SLC35E4Q6ICL7 350 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 CEACAM20Q6UY09 585 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 ASB18Q6ZVZ8 466 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 SPATA6LQ8N4H0 392 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 CADM4Q8NFZ8 388 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 HUS1BQ8NHY5 278 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 TBC1D20Q96BZ9 403 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 LGALS12Q96DT0 336 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 C17orf77Q96MU5 243 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 LITAFQ99732 161 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 CMKLR1Q99788 373 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 MMP25Q9NPA2 562 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 ITM2CQ9NQX7 267 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 C20orf141Q9NUB4 165 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 DLGAP4Q9Y2H0 992 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
CCDC66-221ENST00000487739 URODP06132 367 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 MMP14P50281 582 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 EFNA5P52803 228 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF234Q14588 700 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 RNPS1Q15287 305 aaKnown RBP3.81□□□□□ -1.8
CCDC66-221ENST00000487739 C2orf68Q2NKX9 166 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF766Q5HY98 468 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 TXNDC8Q6A555 127 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 BBS12Q6ZW61 710 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 RRM2BQ7LG56 351 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 TDRPQ86YL5 185 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 SPATA5Q8NB90 893 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF248Q8NDW4 579 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 ZNF524Q96C55 264 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 POLR3CQ9BUI4 534 aaPredicted RBP3.81□□□□□ -1.8
CCDC66-221ENST00000487739 INTS2Q9H0H0 1204 aaKnown RBP3.81□□□□□ -1.8
CCDC66-221ENST00000487739 HINT3Q9NQE9 182 aaKnown RBP3.81□□□□□ -1.8
CCDC66-221ENST00000487739 TMEM160Q9NX00 188 aa3.81□□□□□ -1.8
CCDC66-221ENST00000487739 HCN3Q9P1Z3 774 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms