RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 HS6ST3Q8IZP7 471 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 CMTM8Q8IZV2 173 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 SHKBP1Q8TBC3 707 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 GRIN3AQ8TCU5 1115 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 WFDC5Q8TCV5 224 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 DDI1Q8WTU0 396 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.95□□□□□ -0.5
PKP4-213ENST00000486254 MAELQ96JY0 434 aaKnown RBP11.95□□□□□ -0.5
PKP4-213ENST00000486254 EXOC2Q96KP1 924 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 MIPEPQ99797 713 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 SLC46A2Q9BY10 475 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 CCDC68Q9H2F9 335 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 COG4Q9H9E3 785 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 IL17CQ9P0M4 197 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 TBC1D14Q9P2M4 693 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 PCDHGC4Q9Y5F7 938 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
PKP4-213ENST00000486254 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 OR51F1A6NGY5 319 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 TRPC5OSA6NMA1 111 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 GYG2O15488 501 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 XYLBO75191 536 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PIGNO95427 931 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 ESR1P03372 595 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 CD1DP15813 335 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PTPN2P17706 415 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 CCND1P24385 295 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 WEE1P30291 646 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 CTNNB1P35222 781 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PPARGP37231 505 aaPredicted RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 PTGER3P43115 390 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 INHBCP55103 352 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 ERVFC1P60507 584 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 TIAL1Q01085 375 aaKnown RBP eCLIP11.94□□□□□ -0.5
PKP4-213ENST00000486254 CACNG1Q06432 222 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 LMAN2Q12907 356 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 USP4Q13107 963 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 SEMA3AQ14563 771 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 FRMD7Q6ZUT3 714 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 LSMEM2Q8N112 164 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 CBARPQ8N350 705 aaPredicted RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 NKAPQ8N5F7 415 aaKnown RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 TEX9Q8N6V9 391 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 KDM1BQ8NB78 822 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 SPPL3Q8TCT6 385 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PIH1D2Q8WWB5 315 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 KCNJ9Q92806 393 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 CMTM5Q96DZ9 223 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 CORO1BQ9BR76 489 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 POMKQ9H5K3 350 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 ATP13A3Q9H7F0 1226 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 TCF7L2Q9NQB0 619 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 POLR3BQ9NW08 1133 aaPredicted RBP11.94□□□□□ -0.5
PKP4-213ENST00000486254 ZDHHC7Q9NXF8 308 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 TAS2R1Q9NYW7 299 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 MARK1Q9P0L2 795 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PPIL1Q9Y3C6 166 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PKP3Q9Y446 797 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 ZNF711Q9Y462 761 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 PCDHB1Q9Y5F3 818 aa11.94□□□□□ -0.5
PKP4-213ENST00000486254 A0A0J9YYE9 177 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 CAPN8A6NHC0 703 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 GSC2O15499 205 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 TLL1O43897 1013 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 NDUFS3O75489 264 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 TRBC1P01850 177 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 SPATA31D3P0C874 917 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 TPBGLP0DKB5 382 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 IMPDH1P20839 514 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 RPS3P23396 243 aaKnown RBP eCLIP11.93□□□□□ -0.5
PKP4-213ENST00000486254 RAP1GDS1P52306 607 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 IRX1P78414 480 aaPredicted RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 HERC3Q15034 1050 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 LYPLAL1Q5VWZ2 237 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 ELMSAN1Q6PJG2 1045 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 TMEM207Q6UWW9 146 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 LINGO4Q6UY18 593 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 SPATA31D4Q6ZUB0 917 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 ACAD11Q709F0 780 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 CPSF7Q8N684 471 aaKnown RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 PCDH20Q8N6Y1 951 aaKnown RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 OR2AP1Q8NGE2 309 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 SH3RF2Q8TEC5 729 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 ANKRD49Q8WVL7 239 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 KIAA1191Q96A73 305 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 ECHDC3Q96DC8 303 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 PRR11Q96HE9 360 aaPredicted RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 C1QTNF3Q9BXJ4 246 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 CADM1Q9BY67 442 aaKnown RBP11.93□□□□□ -0.5
PKP4-213ENST00000486254 SLC2A11Q9BYW1 496 aa11.93□□□□□ -0.5
PKP4-213ENST00000486254 CPEB1Q9BZB8 566 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms