RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LRRTM4Q86VH4 590 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 TICAM2Q86XR7 235 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 TMTC1Q8IUR5 882 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 CNBD1Q8NA66 436 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 SNAPC3Q92966 411 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 EIF2AK1Q9BQI3 630 aaKnown RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 REEP2Q9BRK0 252 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 PCDH9Q9HC56 1237 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 MAGEE1Q9HCI5 957 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 RIC8AQ9NPQ8 531 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 ZFP57Q9NU63 452 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 PADI1Q9ULC6 663 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 FAF1Q9UNN5 650 aaPredicted RBP4.11□□□□□ -1.75
SMC4-215ENST00000484799 CRYL1Q9Y2S2 319 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 PSAT1Q9Y617 370 aa4.11□□□□□ -1.75
SMC4-215ENST00000484799 GOLGA6L9A6NEM1 432 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 ANTXRLA6NF34 631 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 CBY3A6NI87 242 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 HOXC11O43248 304 aaPredicted RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 MT-CYBP00156 380 aaPredicted RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 GALTP07902 379 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 IFIT1P09914 478 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 KRT10P13645 584 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 DDX5P17844 614 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 BDNFP23560 247 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 HSD17B4P51659 736 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 ATP12AP54707 1039 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 EFNB1P98172 346 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 RELQ04864 619 aaPredicted RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 SLC20A2Q08357 652 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 SLC45A4Q5BKX6 768 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 FAAH2Q6GMR7 532 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 PLEKHA7Q6IQ23 1121 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 MAATS1Q7Z4T9 603 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 SMIM29Q86T20 159 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 SATL1Q86VE3 508 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 HERC6Q8IVU3 1022 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 ZNF583Q96ND8 569 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 PGLYRP2Q96PD5 576 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 MOV10L1Q9BXT6 1211 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 FBXO2Q9UK22 296 aaPredicted RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
SMC4-215ENST00000484799 PDS5AQ29RF7 1337 aaKnown RBP4.1□□□□□ -1.75
SMC4-215ENST00000484799 GOLGA6L10A0A0M3HER8 536 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 LILRA5A6NI73 299 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 TEX22C9J3V5 150 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 ZNF587BE7ETH6 402 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 CENPBP07199 599 aaPredicted RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 CNTFP26441 200 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 ELF1P32519 619 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 KRT9P35527 623 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 VEGFCP49767 419 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 EIF5P55010 431 aaKnown RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 SORDQ00796 357 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 SREBF2Q12772 1141 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 G3BP1Q13283 466 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMC4-215ENST00000484799 TDGQ13569 410 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 ATG16L1Q676U5 607 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 TTI2Q6NXR4 508 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 KCTD8Q6ZWB6 473 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 LRRC8DQ7L1W4 858 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 LINGO2Q7L985 606 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 KLHDC8BQ8IXV7 354 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 NME8Q8N427 588 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 WDSUB1Q8N9V3 476 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 KBTBD3Q8NAB2 608 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 HERVK_113Q902F9 699 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 MTERF1Q99551 399 aaKnown RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 SH3GL2Q99962 352 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 LRRC1Q9BTT6 524 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 SLC26A6Q9BXS9 759 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 BARHL1Q9BZE3 327 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 UPF2Q9HAU5 1272 aaKnown RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 RALYQ9UKM9 306 aaKnown RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 ERVK-11Q9UQG0 969 aa4.09□□□□□ -1.75
SMC4-215ENST00000484799 LSM4Q9Y4Z0 139 aaKnown RBP4.09□□□□□ -1.75
SMC4-215ENST00000484799 TMEM202A6NGA9 273 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 POLBP06746 335 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 BDKRB2P30411 391 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 EIF2S3P41091 472 aaKnown RBP4.08□□□□□ -1.76
SMC4-215ENST00000484799 AMPHP49418 695 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 HOXA1P49639 335 aaPredicted RBP4.08□□□□□ -1.76
SMC4-215ENST00000484799 METAP2P50579 478 aaKnown RBP eCLIP4.08□□□□□ -1.76
SMC4-215ENST00000484799 PITX1P78337 314 aaPredicted RBP4.08□□□□□ -1.76
SMC4-215ENST00000484799 MPP1Q00013 466 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 UBE3AQ05086 875 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 TRPC3Q13507 836 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 GGNBP1Q5YKI7 109 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 DSG4Q86SJ6 1040 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 NFE4Q86UQ8 179 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 TDRPQ86YL5 185 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 ESX1Q8N693 406 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 TSPYL6Q8N831 410 aa4.08□□□□□ -1.76
SMC4-215ENST00000484799 HDAC2Q92769 488 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms