RNA–Protein interactions for RNA: ENST00000482489.5

ING4-212, Transcript of inhibitor of growth family member 4, human

TSL 3

Gene ING4, Length 659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ING4-212	ENST00000482489	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	SP5	Q6BEB4	398 aa	Predicted RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	XYLT1	Q86Y38	959 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	SFRP1	Q8N474	314 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	NETO2	Q8NC67	525 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	SLC37A2	Q8TED4	501 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	PTCD2	Q8WV60	388 aa	Known RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	NCSTN	Q92542	709 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	SNRNP40	Q96DI7	357 aa	Known RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	ZNF641	Q96N77	438 aa	Predicted RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	RANBP9	Q96S59	729 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	TEX101	Q9BY14	249 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	ING2	Q9H160	280 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	ACTL8	Q9H568	366 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	DNAI1	Q9UI46	699 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	PCDHGC3	Q9UN70	934 aa		11.86	□□□□□ -0.51
ING4-212	ENST00000482489	NIPBL	Q6KC79	2804 aa	eCLIP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	MN1	Q10571	1320 aa	Predicted RBP	11.86	□□□□□ -0.51
ING4-212	ENST00000482489	BUB1B	O60566	1050 aa	Predicted RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	KIAA0754	O94854	1291 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	RHOQ	P17081	205 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ERCC5	P28715	1186 aa	Predicted RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ACTR1B	P42025	376 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	PPM1F	P49593	454 aa	Predicted RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	CCL11	P51671	97 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	PMS1	P54277	932 aa	Known RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ACTR1A	P61163	376 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	DNM1	Q05193	864 aa	Known RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	AFMID	Q63HM1	303 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	DNAAF5	Q86Y56	855 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ZDHHC17	Q8IUH5	632 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	PASD1	Q8IV76	773 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	C1orf131	Q8NDD1	294 aa	Known RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	EHBP1	Q8NDI1	1231 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	CT55	Q8WUE5	264 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	RNF31	Q96EP0	1072 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	EXOC2	Q96KP1	924 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	LURAP1	Q96LR2	239 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	TSG101	Q99816	390 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	GTPBP4	Q9BZE4	634 aa	Known RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	RUBCNL	Q9H714	662 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ACSS2	Q9NR19	701 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.85	□□□□□ -0.51
ING4-212	ENST00000482489	ASF1B	Q9NVP2	202 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	SLC17A4	Q9Y2C5	497 aa		11.85	□□□□□ -0.51
ING4-212	ENST00000482489	SPG11	Q96JI7	2443 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	NDUFA10	O95299	355 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	IVL	P07476	585 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	CMA1	P23946	247 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	PRCP	P42785	496 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	EPHA4	P54764	986 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	ITGA1	P56199	1179 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	SNX16	P57768	344 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	RNASE9	P60153	205 aa	Known RBP	11.84	□□□□□ -0.51
ING4-212	ENST00000482489	FOXM1	Q08050	763 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	IL11RA	Q14626	422 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	TESK1	Q15569	626 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	ZRSR2	Q15696	482 aa	Known RBP	11.84	□□□□□ -0.51
ING4-212	ENST00000482489	COBLL1	Q53SF7	1204 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	CFAP58	Q5T655	872 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	DPPA4	Q7L190	304 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	FAM131B	Q86XD5	332 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	RHOT1	Q8IXI2	618 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	IQCK	Q8N0W5	287 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	SCARF2	Q96GP6	870 aa	Predicted RBP	11.84	□□□□□ -0.51
ING4-212	ENST00000482489	BRD8	Q9H0E9	1235 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	SARS2	Q9NP81	518 aa	Known RBP	11.84	□□□□□ -0.51
ING4-212	ENST00000482489	LHX9	Q9NQ69	397 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	OR12D3	Q9UGF7	316 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	KLHL3	Q9UH77	587 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	PADI1	Q9ULC6	663 aa		11.84	□□□□□ -0.51
ING4-212	ENST00000482489	ARGFX	A6NJG6	315 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	BECN2	A8MW95	431 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	CCNYL3	P0C7X3	344 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	ITGA3	P26006	1051 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	SCNN1A	P37088	669 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	PER3	P56645	1201 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	CDK3	Q00526	305 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	HHEX	Q03014	270 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	LRRC63	Q05C16	580 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	IL10RA	Q13651	578 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	LAMB3	Q13751	1172 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	ELOA	Q14241	798 aa	Known RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	ATL3	Q6DD88	541 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	RWDD4	Q6NW29	188 aa	Known RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	SPNS3	Q6ZMD2	512 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	GDF7	Q7Z4P5	450 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	CAMK1D	Q8IU85	385 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	RASGRP3	Q8IV61	690 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	ECHDC3	Q96DC8	303 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	COQ10A	Q96MF6	247 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	TUBGCP5	Q96RT8	1024 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	BARD1	Q99728	777 aa	Known RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	KLC2	Q9H0B6	622 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	EPB41L1	Q9H4G0	881 aa		11.83	□□□□□ -0.52
ING4-212	ENST00000482489	NOL6	Q9H6R4	1146 aa	Known RBP	11.83	□□□□□ -0.52
ING4-212	ENST00000482489	SYNC	Q9H7C4	482 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms