RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 CARD8Q9Y2G2 431 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 TBC1D30Q9Y2I9 924 aa4.2□□□□□ -1.74
VPS41-212ENST00000482217 FAM237BA0A1B0GVD1 139 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MFSD2BA6NFX1 497 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 AQP7P3A6NL99 342 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MYO1GB0I1T2 1018 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 E9PBE3 544 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 H0YHG0 523 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 PSMD9O00233 223 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 DNALI1O14645 258 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 NVLO15381 856 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 PRPF4O43172 522 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS41-212ENST00000482217 BUB1O43683 1085 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MTX2O75431 263 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 GCATO75600 419 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 RECQL5O94762 991 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 VNN2O95498 520 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 KLKB1P03952 638 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ABCB1P08183 1280 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 ANXA8P13928 327 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZFXP17010 805 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 CKMT2P17540 419 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CYP11B2P19099 503 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 TRIM21P19474 475 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 CD6P30203 668 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 PRKAR1BP31321 381 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 TTKP33981 857 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 KCNJ1P48048 391 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 DGKEP52429 567 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CDH8P55286 799 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 IRX1P78414 480 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 BLOC1S1P78537 153 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SCN1BQ07699 218 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SF3A3Q12874 501 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS41-212ENST00000482217 TMEM115Q12893 351 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 TUBA3CQ13748 450 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 THOC5Q13769 683 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 SNTB1Q13884 538 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 CAMK1Q14012 370 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 E2F2Q14209 437 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 GRM4Q14833 912 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 NPY5RQ15761 445 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 HYAL4Q2M3T9 481 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ERCC6LQ2NKX8 1250 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 TWISTNBQ3B726 338 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 CD300EQ496F6 205 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 LRRC24Q50LG9 513 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SMUG1Q53HV7 270 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 XKR3Q5GH77 459 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ANXA8L1Q5VT79 327 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZNF772Q68DY9 489 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 ETFRF1Q6IPR1 90 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 TUBA3EQ6PEY2 450 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 USP17L6PQ6QN14 398 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MOXD1Q6UVY6 613 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZDHHC24Q6UX98 284 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SLC36A4Q6YBV0 504 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 KIF6Q6ZMV9 814 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZNF600Q6ZNG1 722 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 RHOUQ7L0Q8 258 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 KCTD9Q7L273 389 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 KBTBD6Q86V97 674 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 AMZ2Q86W34 360 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 RFX6Q8HWS3 928 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CCDC28AQ8IWP9 274 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MCEMP1Q8IX19 187 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 DDIASQ8IXT1 998 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZNF679Q8IYX0 411 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 Q8N1X5 172 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 BBS5Q8N3I7 341 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SLC16A11Q8NCK7 471 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CCDC150Q8NCX0 1101 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 TRIM58Q8NG06 486 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 GOLGA5Q8TBA6 731 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 THRSPQ92748 146 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ELP4Q96EB1 424 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SGF29Q96ES7 293 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 MASTLQ96GX5 879 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ARL5BQ96KC2 179 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SAMD8Q96LT4 415 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 DGAT2Q96PD7 388 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 HNRNPABQ99729 332 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 SRSF8Q9BRL6 282 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 PIMREGQ9BSJ6 248 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 ZSCAN5AQ9BUG6 496 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 NTMT1Q9BV86 223 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 CARD6Q9BX69 1037 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 NSRP1Q9H0G5 558 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 STN1Q9H668 368 aaKnown RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 HAUS4Q9H6D7 363 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 C8orf33Q9H7E9 229 aaPredicted RBP4.19□□□□□ -1.74
VPS41-212ENST00000482217 EVA1AQ9H8M9 152 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 C17orf75Q9HAS0 396 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 SYTL2Q9HCH5 934 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 NGBQ9NPG2 151 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 FAM114A2Q9NRY5 505 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 GIMAP4Q9NUV9 329 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 DKK4Q9UBT3 224 aa4.19□□□□□ -1.74
VPS41-212ENST00000482217 LIMA1Q9UHB6 759 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms