RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PRKD2Q9BZL6 878 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 COG4Q9H9E3 785 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 CYP4F12Q9HCS2 524 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 ACOT9Q9Y305 439 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 DENND4CQ5VZ89 1909 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 USP34Q70CQ2 3546 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 A8MX80 341 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 PER2O15055 1255 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 BNIP3LO60238 219 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 TRIM13O60858 407 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 BAG2O95816 211 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 S1PR4O95977 384 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 NAGLUP54802 743 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 BTKQ06187 659 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 SLC12A1Q13621 1099 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 ZNF549Q6P9A3 640 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 PGM2L1Q6PCE3 622 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 SETD3Q86TU7 594 aaPredicted RBP14.46□□□□□ -0.1
CHD3-211ENST00000481999 MAPK15Q8TD08 544 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 CCDC97Q96F63 343 aaPredicted RBP14.46□□□□□ -0.1
CHD3-211ENST00000481999 S100A14Q9HCY8 104 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 NSMCE4AQ9NXX6 385 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 DLGAP2Q9P1A6 1054 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 PPM1HQ9ULR3 514 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 RAI2Q9Y5P3 530 aa14.46□□□□□ -0.1
CHD3-211ENST00000481999 MAGEA13PA6NCF6 341 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 GRXCR1A8MXD5 290 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ALPIP09923 528 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ARSAP15289 507 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CTPS1P17812 591 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CD70P32970 193 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CTNNB1P35222 781 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CTSOP43234 321 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 HTRA4P83105 476 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 SLC5A9Q2M3M2 681 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 RALGPS1Q5JS13 557 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ALG1LQ6GMV1 187 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 FAM109BQ6ICB4 259 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 LRRC8EQ6NSJ5 796 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 IZUMO2Q6UXV1 221 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CHST9Q7L1S5 443 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 GLT6D1Q7Z4J2 308 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CMTM8Q8IZV2 173 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 TDRD5Q8NAT2 981 aaKnown RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 JADE3Q92613 823 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ALG14Q96F25 216 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 PPP1R2P1Q96PQ5 205 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 NR1H4Q96RI1 486 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 TNKS2Q9H2K2 1166 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 OR51B4Q9Y5P0 310 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 TMEM233B4DJY2 109 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 TRIM24O15164 1050 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 DLX3O60479 287 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 PIGNO95427 931 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 NDST3O95803 873 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 FGF1P05230 155 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 JUNP05412 331 aaKnown RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 HLA-DPA1P20036 260 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 MPSTP25325 297 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CRABP2P29373 138 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 KCNC1P48547 511 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 STK19P49842 368 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 ERFP50548 548 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CBX2Q14781 532 aaPredicted RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 UGP2Q16851 508 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 TMEM240Q5SV17 173 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 GPR158Q5T848 1215 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 HECTD2Q5U5R9 776 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 CAMK1DQ8IU85 385 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 HERC6Q8IVU3 1022 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 RDH11Q8TC12 318 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 BRSK1Q8TDC3 778 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 POF1BQ8WVV4 589 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 MRPS31Q92665 395 aaKnown RBP14.45□□□□□ -0.1
CHD3-211ENST00000481999 EID2BQ96D98 161 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ZNF599Q96NL3 588 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 RANBP9Q96S59 729 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ECSITQ9BQ95 431 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 LHX3Q9UBR4 397 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 STOML2Q9UJZ1 356 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ANKRD6Q9Y2G4 727 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 PCDHB9Q9Y5E1 797 aa14.45□□□□□ -0.1
CHD3-211ENST00000481999 ALPK3Q96L96 1907 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 TARM1B6A8C7 271 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 DCXO43602 365 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 TLL1O43897 1013 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 BAIAP3O94812 1187 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 CCDC166P0CW27 439 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 GRIA4P48058 902 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 LEPRP48357 1165 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 EPHB1P54762 984 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 FBXO48Q5FWF7 155 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 ITIH5Q86UX2 942 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 LCA5Q86VQ0 697 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 TXNDC5Q8NBS9 432 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 GATA6Q92908 595 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 CLP1Q92989 425 aaKnown RBP14.44□□□□□ -0.1
CHD3-211ENST00000481999 IGSF5Q9NSI5 407 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 OXSMQ9NWU1 459 aa14.44□□□□□ -0.1
CHD3-211ENST00000481999 CDH22Q9UJ99 828 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms