RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HES3Q5TGS1 186 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 ITPRIPL1Q6GPH6 555 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 PCSK4Q6UW60 755 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 KLHL7Q8IXQ5 586 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 CCDC89Q8N998 374 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 LPCAT1Q8NF37 534 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 IPMKQ8NFU5 416 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 FCRL5Q96RD9 977 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 GORASP1Q9BQQ3 440 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 WRAP53Q9BUR4 548 aaKnown RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 TDRD1Q9BXT4 1180 aaKnown RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 DDX47Q9H0S4 455 aaKnown RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 GBA3Q9H227 469 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 PCDH9Q9HC56 1237 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 PCDH12Q9NPG4 1184 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 HOMER3Q9NSC5 361 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 DRG1Q9Y295 367 aaKnown RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 CA5BQ9Y2D0 317 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 LRRK1Q38SD2 2015 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 TSPAN11A1L157 253 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 LRRC72A6NJI9 287 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 TLR4O00206 839 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 SLC7A4O43246 635 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 SPINT1O43278 529 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 HTRA2O43464 458 aaPredicted RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 PLRG1O43660 514 aaKnown RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 MMP20O60882 483 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 RNGTTO60942 597 aaKnown RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 GCATO75600 419 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 AGTP01019 485 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 GIMD1P0DJR0 217 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 CA4P22748 312 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 STIP1P31948 543 aaKnown RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 RPL22P35268 128 aaKnown RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 VPS41P49754 854 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 WNT3AP56704 352 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 CCDC15Q0P6D6 951 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 OLIG2Q13516 323 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 SPARCL1Q14515 664 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 PRPSAP1Q14558 356 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 P3H1Q32P28 736 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 PROX2Q3B8N5 592 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 DENND2CQ68D51 928 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 ERAP2Q6P179 960 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 BRAT1Q6PJG6 821 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 CCDC137Q6PK04 289 aaKnown RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 KDELC1Q6UW63 502 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 SLC25A41Q8N5S1 370 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 ATL2Q8NHH9 583 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 PIH1D2Q8WWB5 315 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 ECHDC3Q96DC8 303 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 IFT43Q96FT9 208 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 SERAC1Q96JX3 654 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 APOL2Q9BQE5 337 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 MLPHQ9BV36 600 aaPredicted RBP9.08□□□□□ -0.96
VCP-206ENST00000480327 AASDHPPTQ9NRN7 309 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 DKK3Q9UBP4 350 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 FAM153AQ9UHL3 310 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 FADS3Q9Y5Q0 445 aa9.08□□□□□ -0.96
VCP-206ENST00000480327 RP1P56715 2156 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 A0A1W2PQU0 124 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 IGLON5A6NGN9 336 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 KIF2AO00139 706 aaPredicted RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 TRIM38O00635 465 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 RIOK3O14730 519 aaKnown RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 FZD6O60353 706 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 USP12O75317 370 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 ZNF189O75820 626 aaPredicted RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 ANXA9O76027 345 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 PRLP01236 227 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 KRT14P02533 472 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 C1SP09871 688 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 PIRTP0C851 137 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 JUPP14923 745 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 ACTN2P35609 894 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 HNF1BP35680 557 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 CHRNA4P43681 627 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 ABCG1P45844 678 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 GEMP55040 296 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 POLR2LP62875 67 aaKnown RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 MRPS25P82663 173 aaKnown RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 CDK18Q07002 472 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 C2orf54Q08AI8 447 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 MPP3Q13368 585 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 CYP1B1Q16678 543 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 QPCTQ16769 361 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 PARP6Q2NL67 630 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 INAVAQ3KP66 663 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 SEL1L3Q68CR1 1132 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 NAPEPLDQ6IQ20 393 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 DRICH1Q6PGQ1 229 aaPredicted RBP9.07□□□□□ -0.96
VCP-206ENST00000480327 SLC25A45Q8N413 288 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 MFSD2AQ8NA29 543 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 HCAR2Q8TDS4 363 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 CXorf40AQ8TE69 158 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 RAB7BQ96AH8 199 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 TADA1Q96BN2 335 aa9.07□□□□□ -0.96
VCP-206ENST00000480327 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms