RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SNAP29O95721 258 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 C7P10643 843 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CYP11B1P15538 503 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 STMN1P16949 149 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CLCN3P51790 818 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 ARHGDIAP52565 204 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 GPC5P78333 572 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 TUBB3Q13509 450 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 BFSP2Q13515 415 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC9A4Q6AI14 798 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CCDC103Q8IW40 242 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 EID3Q8N140 333 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 SCML4Q8N228 414 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CPA6Q8N4T0 437 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 KLHL6Q8WZ60 621 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 SNAPC3Q92966 411 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC47A1Q96FL8 570 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 PPA2Q9H2U2 334 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 ALG13Q9NP73 1137 aaKnown RBP12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
RTFDC1-207ENST00000477573 H3BRB1 525 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 UGT2B11O75310 529 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SNAPINO95295 136 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 EDN1P05305 212 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 BMP4P12644 408 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 F8A1P23610 371 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 HTR3AP46098 478 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF157P51786 506 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 TSC22D1Q15714 1073 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 IRAK1BP1Q5VVH5 260 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 CST9Q5W186 159 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 VN1R5Q7Z5H4 357 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC47A2Q86VL8 602 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 OR6J1Q8NGC5 347 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 OR6Q1Q8NGQ2 317 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 E2F7Q96AV8 911 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 RNF170Q96K19 258 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 PI4K2AQ9BTU6 479 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ADGRE2Q9UHX3 823 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 RNF112Q9ULX5 631 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 AUP1Q9Y679 476 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 EVPLQ92817 2033 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 NRCAMQ92823 1304 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 FAM170AA1A519 330 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 TSPAN4O14817 238 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ABCB7O75027 752 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SNNO75324 88 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 FAM155BO75949 473 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 JUNP05412 331 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 PSKH1P11801 424 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 UQCRC1P31930 480 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 BST1Q10588 318 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 RIN1Q13671 783 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SMYD5Q6GMV2 418 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ABRAXAS1Q6UWZ7 409 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 BBS12Q6ZW61 710 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SPATA2LQ8IUW3 424 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 MICU2Q8IYU8 434 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 TAGAPQ8N103 731 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ST13P5Q8NFI4 369 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 RHOXF1Q8NHV9 184 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 PHF10Q8WUB8 498 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 TFB1MQ8WVM0 346 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC9A6Q92581 669 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 TESCQ96BS2 214 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 PWWP2AQ96N64 755 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 FAM111AQ96PZ2 611 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 THAP2Q9H0W7 228 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 AKT3Q9Y243 479 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
RTFDC1-207ENST00000477573 CLUHO75153 1309 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PLOD2O00469 737 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 ZNF780AO75290 641 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PROZP22891 400 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MMP8P22894 467 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 HOXC13P31276 330 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 GRK3P35626 688 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MARCKSL1P49006 195 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MBTD1Q05BQ5 628 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC13A2Q13183 592 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 CUL2Q13617 745 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 MAPK11Q15759 364 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 HIST2H2ACQ16777 129 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 DGUOKQ16854 277 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
RTFDC1-207ENST00000477573 PLEKHG6Q3KR16 790 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms