RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 VAT1Q99536 393 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 ADGRE3Q9BY15 652 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 WDR26Q9H7D7 661 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 FGF22Q9HCT0 170 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 PTPRBP23467 1997 aa18.91■□□□□ 0.62
PTCD3-210ENST00000473829 C1orf232A0A0U1RR37 186 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 AQP9O43315 295 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 CELA2BP08218 269 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-210ENST00000473829 TSHRP16473 764 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 HTR1BP28222 390 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 WNT3AP56704 352 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 SHC2P98077 582 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 PPARDQ03181 441 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 PRRT3Q5FWE3 981 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 FAXCQ5TGI0 409 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 MEI1Q5TIA1 1274 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 DARS2Q6PI48 645 aaKnown RBP18.9■□□□□ 0.62
PTCD3-210ENST00000473829 LYSMD3Q7Z3D4 306 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 RAB44Q7Z6P3 723 aaPredicted RBP18.9■□□□□ 0.62
PTCD3-210ENST00000473829 HEATR4Q86WZ0 1026 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 HID1Q8IV36 788 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 CHCHD4Q8N4Q1 142 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 OR1E3Q8WZA6 343 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 MRGPRX2Q96LB1 330 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 WDR24Q96S15 920 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 AGAP2Q99490 1192 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 CLPBQ9H078 707 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 USP29Q9HBJ7 922 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 MRPL40Q9NQ50 206 aaKnown RBP18.9■□□□□ 0.62
PTCD3-210ENST00000473829 KLQ9UEF7 1012 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 FAM153AQ9UHL3 310 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 RSPH14Q9UHP6 348 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 ANGPTL2Q9UKU9 493 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 DNPEPQ9ULA0 475 aa18.9■□□□□ 0.62
PTCD3-210ENST00000473829 APOBEC2Q9Y235 224 aaKnown RBP18.9■□□□□ 0.62
PTCD3-210ENST00000473829 GOLGA6CA6NDK9 693 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 GOLGA6BA6NDN3 693 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 CACNB4O00305 520 aaPredicted RBP18.89■□□□□ 0.61
PTCD3-210ENST00000473829 KCNN4O15554 427 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 NDST3O95803 873 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 GOLGA6DP0CG33 693 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 MYF5P13349 255 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 CHRNA4P43681 627 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 ACADVLP49748 655 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 HK3P52790 923 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 SRP54P61011 504 aaKnown RBP18.89■□□□□ 0.61
PTCD3-210ENST00000473829 DPTQ07507 201 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 TCEA2Q15560 299 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 DEFB133Q30KQ1 61 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 CCDC157Q569K6 752 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 RAET1GQ6H3X3 334 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 OR56A4Q8NGH8 313 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 BTN2A2Q8WVV5 523 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 ADAMTS14Q8WXS8 1223 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 AP2M1Q96CW1 435 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 TEX101Q9BY14 249 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 GBA3Q9H227 469 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 KCNF1Q9H3M0 494 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 KCTD5Q9NXV2 234 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 GOLGA6AQ9NYA3 693 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 NLGN3Q9NZ94 848 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 SPASTQ9UBP0 616 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 TRHDEQ9UKU6 1024 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 SPO11Q9Y5K1 396 aa18.89■□□□□ 0.61
PTCD3-210ENST00000473829 ASPMQ8IZT6 3477 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 LY6G6EA0A0G2JKS1 128 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 LOC285095A0A1B0GVY8 99 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 RASGRP1O95267 797 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
PTCD3-210ENST00000473829 HOXC4P09017 264 aaPredicted RBP18.88■□□□□ 0.61
PTCD3-210ENST00000473829 MYCLP1P12525 358 aaPredicted RBP18.88■□□□□ 0.61
PTCD3-210ENST00000473829 CDK3Q00526 305 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ANKRD20A2Q5SQ80 823 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ANKRD20A1Q5TYW2 823 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ANKRD20A3Q5VUR7 823 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ZNF765Q7L2R6 523 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 RD3Q7Z3Z2 195 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 SLC35B2Q8TB61 432 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 CCDC110Q8TBZ0 833 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 PTCD2Q8WV60 388 aaKnown RBP18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ATG4AQ8WYN0 398 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 TBATAQ96M53 351 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 RIOK2Q9BVS4 552 aaKnown RBP18.88■□□□□ 0.61
PTCD3-210ENST00000473829 SCNM1Q9BWG6 230 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 SLC13A1Q9BZW2 595 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 KLK13Q9UKR3 277 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 SHOC2Q9UQ13 582 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 ZNF711Q9Y462 761 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 CSNK1G3Q9Y6M4 447 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 U3KQA8 63 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 FRYQ5TBA9 3013 aa18.88■□□□□ 0.61
PTCD3-210ENST00000473829 AKAP13Q12802 2813 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 WDFY3Q8IZQ1 3526 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 GOLGA6L9A6NEM1 432 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 AURKAO14965 403 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 NRDCO43847 1150 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 TRIM16O95361 564 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 SLC4A1P02730 911 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 PSMB4P28070 264 aa18.87■□□□□ 0.61
PTCD3-210ENST00000473829 TEAD1P28347 426 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms