RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TMEM19Q96HH6 336 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 PDCL3Q9H2J4 239 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 PPP1R3EQ9H7J1 279 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 KIF9Q9HAQ2 790 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 ASAH2Q9NR71 780 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 PCDHB16Q9NRJ7 776 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 C1RLQ9NZP8 487 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 TINAGQ9UJW2 476 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 PCDHAC2Q9Y5I4 1007 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 CEPT1Q9Y6K0 416 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 KDM3AQ9Y4C1 1321 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 IGHV4OR15-8A0A075B7B6 117 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 A0A0G2JPF8 293 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 A0A1W2PPH5 198 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HNRNPCL3B7ZW38 293 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 MID1O15344 667 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HNRNPCL1O60812 293 aaKnown RBP3.93□□□□□ -1.78
BRCA2-202ENST00000470094 SEC14L2O76054 403 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 CENPBP07199 599 aaPredicted RBP3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HNRNPCL4P0DMR1 293 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 UBL4AP11441 157 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 ATP1A3P13637 1013 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 KRT10P13645 584 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 TNFAIP3P21580 790 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 CLCNKAP51800 687 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 NLRP5P59047 1200 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 KRTAP10-9P60411 292 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 MPP1Q00013 466 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 ALG11Q2TAA5 492 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HYIQ5T013 277 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HIST2H2BDQ6DRA6 164 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 RGMBQ6NW40 437 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 RSRC2Q7L4I2 434 aaKnown RBP3.93□□□□□ -1.78
BRCA2-202ENST00000470094 HAPLN4Q86UW8 402 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 SFR1Q86XK3 245 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 FOXRED2Q8IWF2 684 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 NAGSQ8N159 534 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 RFLNBQ8N5W9 214 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 POC1AQ8NBT0 407 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 KCNH5Q8NCM2 988 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 METTL6Q8TCB7 284 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 NEK9Q8TD19 979 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 FIG4Q92562 907 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 TMEM47Q9BQJ4 181 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 SLC26A6Q9BXS9 759 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 USP44Q9H0E7 712 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
BRCA2-202ENST00000470094 UNC45AQ9H3U1 944 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 MCM9Q9NXL9 1143 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 KCNG2Q9UJ96 466 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 INTS6Q9UL03 887 aaKnown RBP3.93□□□□□ -1.78
BRCA2-202ENST00000470094 MKLN1Q9UL63 735 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 CAPN7Q9Y6W3 813 aa3.93□□□□□ -1.78
BRCA2-202ENST00000470094 GOLGA6L9A6NEM1 432 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PRAC2D3DTV9 90 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 TULP2O00295 520 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 MBD4O95243 580 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 FTCDO95954 541 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 BDKRB2P30411 391 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 ELF1P32519 619 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 KRT9P35527 623 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PIP4K2AP48426 406 aaPredicted RBP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 RXRGP48443 463 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 HNRNPH2P55795 449 aaKnown RBP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 RPL7AP62424 266 aaKnown RBP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 G3BP1Q13283 466 aaKnown RBP eCLIP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 FAM76BQ5HYJ3 339 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 TSSK4Q6SA08 328 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PQLC2Q6ZP29 291 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 C1orf122Q6ZSJ8 110 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 TUBA1AQ71U36 451 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 CHERPQ8IWX8 916 aaKnown RBP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF441Q8N8Z8 693 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PCYOX1LQ8NBM8 494 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 SPATA22Q8NHS9 363 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 SPATA20Q8TB22 786 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PSPC1Q8WXF1 523 aaKnown RBP3.92□□□□□ -1.78
BRCA2-202ENST00000470094 SORCS1Q8WY21 1168 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 SMARCE1Q969G3 411 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PIP5K1AQ99755 562 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 TUBA1CQ9BQE3 449 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 KCNN2Q9H2S1 579 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 EVA1AQ9H8M9 152 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 EBF2Q9HAK2 575 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PCDH9Q9HC56 1237 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 KCNS2Q9ULS6 477 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 PSAT1Q9Y617 370 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 TAF1P21675 1872 aa3.92□□□□□ -1.78
BRCA2-202ENST00000470094 NPIPB15A6NHN6 443 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 VCYO14598 125 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 KRT36O76013 467 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF432O94892 652 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 RTN3O95197 1032 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 F7P08709 466 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 SPARCP09486 303 aa3.91□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF182P17025 639 aaPredicted RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 TMPOP42166 694 aaKnown RBP3.91□□□□□ -1.78
BRCA2-202ENST00000470094 CCR9P51686 369 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms