RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 SCRN2Q96FV2 425 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 TEFMQ96QE5 360 aaKnown RBP12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 NUDCD1Q96RS6 583 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 DDA1Q9BW61 102 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 GOLGA6AQ9NYA3 693 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 FOXJ2Q9P0K8 574 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 TUBD1Q9UJT1 453 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 SCINQ9Y6U3 715 aa12.66□□□□□ -0.38
GAPVD1-214ENST00000469528 IGHV5-10-1A0A0J9YXX1 117 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 TMEM191CA6NGB0 347 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 HEXIM1O94992 359 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CPP00450 1065 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 FGF3P11487 239 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CES1P23141 567 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 GPR1P46091 355 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CCR10P46092 362 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 PPM1FP49593 454 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 MAZP56270 477 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CDK3Q00526 305 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CTBSQ01459 385 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 MYL5Q02045 173 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 SLC10A7Q0GE19 358 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 C16orf72Q14CZ0 275 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 ARMC12Q5T9G4 340 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 MARC1Q5VT66 337 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 RAET1GQ6H3X3 334 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 TMEM71Q6P5X7 295 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 SLC30A9Q6PML9 568 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 TMCO3Q6UWJ1 677 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 IRF2BP2Q7Z5L9 587 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 VASH2Q86V25 355 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 ARHGAP12Q8IWW6 846 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CBARPQ8N350 705 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 OR10G6Q8NH81 332 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 NKD1Q969G9 470 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 KIAA1143Q96AT1 154 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 TRIM11Q96F44 468 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 DTD2Q96FN9 168 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 KCTD15Q96SI1 283 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 ZPBPQ9BS86 351 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 SNRNP25Q9BV90 132 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 FRMD8Q9BZ67 464 aaPredicted RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 STN1Q9H668 368 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 SLC39A1Q9NY26 324 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 KCNK4Q9NYG8 393 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 DNPEPQ9ULA0 475 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 SLC17A4Q9Y2C5 497 aa12.65□□□□□ -0.38
GAPVD1-214ENST00000469528 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 B4E171 279 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 FTLP02792 175 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 MYBL1P10243 752 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CCL4P13236 92 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 GM2AP17900 193 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 MAP4P27816 1152 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 MIPP30301 263 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SERPINB6P35237 376 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 PCK1P35558 622 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 ADCY8P40145 1251 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 ETV3P41162 512 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 TSPAN7P41732 249 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CDH6P55285 790 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 OGDHQ02218 1023 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SRSF6Q13247 344 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 LRP8Q14114 963 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CNGA3Q16281 694 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CA9Q16790 459 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 KCTD16Q68DU8 428 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 TMPRSS9Q7Z410 1059 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 RAVER1Q8IY67 606 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CACNA2D3Q8IZS8 1091 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SH3KBP1Q96B97 665 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SLC38A3Q99624 504 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 NUDT22Q9BRQ3 303 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SLC12A9Q9BXP2 914 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 ZMYND15Q9H091 742 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 TRIT1Q9H3H1 467 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 SUDS3Q9H7L9 328 aaPredicted RBP12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
GAPVD1-214ENST00000469528 IGHV1OR21-1A0A087WYE8 117 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 ZNF891A8MT65 544 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 PPM1DO15297 605 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 SLC2A4P14672 509 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 ZNF30P17039 623 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 UGT1A3P35503 534 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 ACTR1BP42025 376 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 ACTR1AP61163 376 aa12.63□□□□□ -0.39
GAPVD1-214ENST00000469528 CYP4F2P78329 520 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms