RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 VPS4AQ9UN37 437 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 MTMR6Q9Y217 621 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 PCDHB4Q9Y5E5 795 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 PCDHGA3Q9Y5H0 932 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 MORC2Q9Y6X9 1032 aaPredicted RBP5.32□□□□□ -1.56
PTPN4-209ENST00000469511 POLEQ07864 2286 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 PCSK5Q92824 1860 aa5.32□□□□□ -1.56
PTPN4-209ENST00000469511 A8MU76 341 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 NEMP1O14524 444 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 PPM1DO15297 605 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 INSIG1O15503 277 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 KRT86O43790 486 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CALUO43852 315 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CLDN11O75508 207 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 TM7SF2O76062 418 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 FBXO21O94952 628 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RASGRP1O95267 797 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CPNE6O95741 557 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 FGF1P05230 155 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 UGT2B4P06133 528 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 KRT13P13646 458 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ZNF28P17035 718 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 AK4P27144 223 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 GTF2H1P32780 548 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CD68P34810 354 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 PSMC2P35998 433 aaKnown RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ACVRL1P37023 503 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 SERPINH1P50454 418 aaKnown RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 LIMK2P53671 638 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CDH4P55283 916 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RAC1P63000 192 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 YWHAZP63104 245 aaKnown RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CHAF1BQ13112 559 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 NME3Q13232 169 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ARHGEF7Q14155 803 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ERV3-1Q14264 604 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RABEP1Q15276 862 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 POU4F3Q15319 338 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 C14orf28Q4W4Y0 310 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RAB6CQ53S08 254 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 SNAP47Q5SQN1 464 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ATXN7L2Q5T6C5 722 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 SPECC1LQ69YQ0 1117 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 TCTN3Q6NUS6 607 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RRAGAQ7L523 313 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 PIM3Q86V86 326 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 HEATR4Q86WZ0 1026 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 GKN2Q86XP6 184 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CCDC13Q8IYE1 715 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 SMYD4Q8IYR2 804 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 NRSN1Q8IZ57 195 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 FMR1NBQ8N0W7 255 aaPredicted RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 WDTC1Q8N5D0 677 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 DCAF4L2Q8NA75 395 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 Q8NA96 180 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CCDC150Q8NCX0 1101 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 SREK1Q8WXA9 508 aaKnown RBP5.31□□□□□ -1.56
PTPN4-209ENST00000469511 GAL3ST3Q96A11 431 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 TMEM159Q96B96 161 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 C19orf60Q96EN9 201 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CATSPER2Q96P56 530 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RUFY1Q96T51 708 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 RAB6CQ9H0N0 254 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 DPEP2Q9H4A9 486 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 FAM204AQ9H8W3 233 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 POPDC2Q9HBU9 364 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 EXOC1Q9NV70 894 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 DDIT4Q9NX09 232 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 DONSONQ9NYP3 566 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 MKL2Q9ULH7 1088 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 PCDHA7Q9UN72 937 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 COQ4Q9Y3A0 265 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 PLEKHM1Q9Y4G2 1056 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 FER1L5A0AVI2 2057 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 ADGRG4Q8IZF6 3080 aa5.31□□□□□ -1.56
PTPN4-209ENST00000469511 CELSR1Q9NYQ6 3014 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 CSMD2Q7Z408 3487 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 TRBV23OR9-2A0A075B6M9 112 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 ARHGAP10A1A4S6 786 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 FAM221AA4D161 298 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 DRGXA6NNA5 263 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 M0QYT0 321 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 KRIT1O00522 736 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 CUTAO60888 179 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 ADAM11O75078 769 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 PPP6R2O75170 966 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 SORBS2O94875 1100 aaKnown RBP5.3□□□□□ -1.56
PTPN4-209ENST00000469511 ECEL1O95672 775 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 TNFP01375 233 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 PCCBP05166 539 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 PAEPP09466 180 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 ALPIP09923 528 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 THRAP10827 490 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 PNLIPP16233 465 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 GM2AP17900 193 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 TCN2P20062 427 aa5.3□□□□□ -1.56
PTPN4-209ENST00000469511 PMS1P54277 932 aaKnown RBP5.3□□□□□ -1.56
PTPN4-209ENST00000469511 KRT83P78385 493 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms