RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 OR4C6Q8NH72 309 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 KRT35Q92764 455 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 TADA1Q96BN2 335 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 ZNF830Q96NB3 372 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 APOOQ9BUR5 198 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 HAUS2Q9NVX0 235 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 KCTD5Q9NXV2 234 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 FTSJ1Q9UET6 329 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 EFR3BQ9Y2G0 817 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MSRB2Q9Y3D2 182 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 PCDHA3Q9Y5H8 950 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 HEY1Q9Y5J3 304 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 LRP4O75096 1905 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 hCG_1818297A0A087WSY0 165 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 A0A0J9YYE9 177 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 NEMP2A6NFY4 417 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 NPIPB15A6NHN6 443 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ENC1O14682 589 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 PPP1R12AO14974 1030 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 CST8O60676 142 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TRBC1P01850 177 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 CDK4P11802 303 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 KRT10P13645 584 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TNNT1P13805 278 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 CKMT2P17540 419 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 SPINK2P20155 84 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TGM2P21980 687 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ACADVLP49748 655 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 THOP1P52888 689 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 RPL26P61254 145 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ITKQ08881 620 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 PRKD1Q15139 912 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 SMAD1Q15797 465 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ZNF542PQ5EBM4 170 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TFDP3Q5H9I0 405 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ESRP1Q6NXG1 681 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 BBS12Q6ZW61 710 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TMPRSS7Q7RTY8 843 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 TECPR1Q7Z6L1 1165 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 DAAM2Q86T65 1068 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 NLRP8Q86W28 1048 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 RFX6Q8HWS3 928 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 RAVER1Q8IY67 606 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 PNPLA1Q8N8W4 532 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 PLA2G15Q8NCC3 412 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ZNF548Q8NEK5 533 aaPredicted RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 GATA6Q92908 595 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 LYSMD1Q96S90 227 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 CNTNAP3Q9BZ76 1288 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 DNAJC28Q9NX36 388 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 NLGN3Q9NZ94 848 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 KLK13Q9UKR3 277 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 RPL26L1Q9UNX3 145 aaKnown RBP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL4A6-205ENST00000468338 RP1P56715 2156 aa11.16□□□□□ -0.62
COL4A6-205ENST00000468338 ARHGEF17Q96PE2 2063 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 LY6G6EA0A0G2JKS1 128 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 H3BM21 787 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 K7ESM1 405 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 TPP1O14773 563 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CAPNS1P04632 268 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CYP2A6P11509 494 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PECAM1P16284 738 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PCSK2P16519 638 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 ACP1P24666 158 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CTNNA2P26232 953 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 TEAD1P28347 426 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PTPN7P35236 360 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 HNF1BP35680 557 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 KIAA1024LP59773 190 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CBLBQ13191 982 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 DNAJC3Q13217 504 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 ILKQ13418 452 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 NFATC4Q14934 902 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PTPRRQ15256 657 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 SLC14A2Q15849 920 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CDKN3Q16667 212 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 TEX44Q53QW1 395 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 ODF2Q5BJF6 829 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PNCKQ6P2M8 343 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 USP45Q70EL2 814 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 HSD11B1LQ7Z5J1 315 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 TSPAN33Q86UF1 283 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 PELI3Q8N2H9 469 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 KIAA1524Q8TCG1 905 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 BTN2A2Q8WVV5 523 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 ALKBH8Q96BT7 664 aaKnown RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 DTD2Q96FN9 168 aa11.15□□□□□ -0.62
COL4A6-205ENST00000468338 IMP4Q96G21 291 aaKnown RBP11.15□□□□□ -0.62
COL4A6-205ENST00000468338 RBM41Q96IZ5 413 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms