RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SREBF2Q12772 1141 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 RNPS1Q15287 305 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 TAF11Q15544 211 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 TCTN1Q2MV58 587 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF766Q5HY98 468 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF280DQ6N043 979 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 TRNP1Q6NT89 227 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 TMEM81Q6P7N7 255 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 KCTD18Q6PI47 426 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 LCTLQ6UWM7 567 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF852Q6ZMS4 543 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 NOTCH2NLQ7Z3S9 236 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 TADA2BQ86TJ2 420 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 NKAPQ8N5F7 415 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ZBTB2Q8N680 514 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ENAHQ8N8S7 591 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 GRAPLQ8TC17 118 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 MPHOSPH6Q99547 160 aaKnown RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 HEMGNQ9BXL5 484 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 PLEKHA4Q9H4M7 779 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 PPP1R3EQ9H7J1 279 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ITM2CQ9NQX7 267 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 FBXO9Q9UK97 447 aaPredicted RBP2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 POU2F3Q9UKI9 436 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 RCOR1Q9UKL0 485 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 PADI3Q9ULW8 664 aa2.85□□□□□ -1.95
GTF3C3-209ENST00000466862 hCG_1642624A0A1W2PR95 340 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TEX22C9J3V5 150 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 LDLRAD4O15165 306 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TACC1O75410 805 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 MTA2O94776 668 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TFP02787 698 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TUBBP07437 444 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 GALTP07902 379 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 DDIT3P35638 169 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 GPD2P43304 727 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 ARL4CP56559 192 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TUBB4BP68371 445 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 PMP22Q01453 160 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 ITGADQ13349 1161 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 PDCD2Q16342 344 aaPredicted RBP2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 SIRPB2Q5JXA9 342 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 CCNYL2Q5T2Q4 361 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 ZNF497Q6ZNH5 498 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 CPOQ8IVL8 374 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 APLFQ8IW19 511 aaPredicted RBP2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 RNF113BQ8IZP6 322 aaKnown RBP2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 METTL27Q8N6F8 245 aaPredicted RBP2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 C11orf65Q8NCR3 313 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TNIP2Q8NFZ5 429 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 HUS1BQ8NHY5 278 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 HERVK_113Q902F9 699 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 STAMQ92783 540 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 TBC1D20Q96BZ9 403 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 RHBDF1Q96CC6 855 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 CDCA5Q96FF9 252 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 BBS4Q96RK4 519 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 SH3GL2Q99962 352 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 SYT17Q9BSW7 474 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 BABAM1Q9NWV8 329 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 HSF4Q9ULV5 492 aa2.84□□□□□ -1.95
GTF3C3-209ENST00000466862 COL2A1P02458 1487 aaPredicted RBP2.84□□□□□ -1.96
GTF3C3-209ENST00000466862 CACNA1FO60840 1977 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 WDR1O75083 606 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 INHBAP08476 426 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 POU1F1P28069 291 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 IL15P40933 162 aaPredicted RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 METAP2P50579 478 aaKnown RBP eCLIP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ISL1P61371 349 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF234Q14588 700 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF876PQ49A33 203 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ZC2HC1BQ5TFG8 222 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 IRAK1BP1Q5VVH5 260 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ATG16L1Q676U5 607 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 KCTD8Q6ZWB6 473 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 NRROSQ86YC3 692 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 SPATA6LQ8N4H0 392 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 PCDH20Q8N6Y1 951 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 OR10V1Q8NGI7 309 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 SLC41A2Q96JW4 573 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF570Q96NI8 536 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 FAM110AQ9BQ89 295 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 PYM1Q9BRP8 204 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 BARHL1Q9BZE3 327 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 HINT3Q9NQE9 182 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 IL1RAPL1Q9NZN1 696 aa2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 ZNF624Q9P2J8 865 aaPredicted RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 LSM4Q9Y4Z0 139 aaKnown RBP2.83□□□□□ -1.96
GTF3C3-209ENST00000466862 IGKV3D-15A0A087WSY6 115 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 GAGE10A6NGK3 116 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 KRTAP16-1A8MUX0 517 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 BAG4O95429 457 aaKnown RBP2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 IGHV4-39P01824 125 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 KRT5P13647 590 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 RRM1P23921 792 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 BDKRB2P30411 391 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 FASLGP48023 281 aa2.82□□□□□ -1.96
GTF3C3-209ENST00000466862 HOXA1P49639 335 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms